Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02245 ATGGGTTCTTTTGTTTCAGGAACAATGCGGGAGGACGTGGTTTTATCTGTTGTTGATCCTCTTCTTATGGCATCTTCATCTTTGCAACCCCAGCATGGTGGTGATGCCGGAGATTCACTCATTGAGGATGCTACTCAGGTCAATGATGTTGGGGAATGTGATACTTTGGAAGAACAGGAACAAGAACAAGAGCAAGAAAAAGACCTTACTCTAATGGTGGAGTGTCGCATTTGCCAGGAAGATGATACTCTTCAAAATTTGGACATACCCTGTGCATGCAAGGGAACCTTGAAGTTTGCTCATAGGGAATGTGTTCAGCTATGGTGTTACGAGAAGGGTGATGCAATTTGTGAGATCTGCCACCAGCCATTCAAACCTGACTATTCTGTGACAACAACTGTCATCCATCCAGGAGATACTTCAATTGATATCAGTGATGACTGGGAAAGCTATAGTTTTCCTTTAGATTTGCACAATTCTCGCCTTTTGGCTATTGCAGCTGTAGAGCACCAAGTTCCGGAGACTGGTGAAGATTATGCCTATGCTGCTGGCACTGGTGGAATTACATTATGGCACTCTGTTGGTCTAATTTTAATGGCTCTTTTACTTCTGAGGCATGTTGCTCCCCTCTTCAATGCTGATGTGGAGAAAGCTTTAACATATTTTTATTTTTTCTTTCTTCGTGCGGCTGCTGTTGTCCTTCCTTGCTATCTTATGGCGCGGATAATTCGCGTAATACTGCATCAAAGGCAAAGACAACAAGCACCTGAAGAACTTGCATTTATGCTACAAGCAGACGAACAAGAAATTGTAGTTGGATCAGTGGTGCTGGAGAATAAGATCTGA 846 0.4303 MGSFVSGTMREDVVLSVVDPLLMASSSLQPQHGGDAGDSLIEDATQVNDVGECDTLEEQEQEQEQEKDLTLMVECRICQEDDTLQNLDIPCACKGTLKFAHRECVQLWCYEKGDAICEICHQPFKPDYSVTTTVIHPGDTSIDISDDWESYSFPLDLHNSRLLAIAAVEHQVPETGEDYAYAAGTGGITLWHSVGLILMALLLLRHVAPLFNADVEKALTYFYFFFLRAAAVVLPCYLMARIIRVILHQRQRQQAPEELAFMLQADEQEIVVGSVVLENKI 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02245 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 133 IPR013083 -
Phco7g02245 281 SUPERFAMILY RING/U-box 73 125 - -
Phco7g02245 281 SMART ringv_2 74 121 IPR011016 GO:0008270
Phco7g02245 281 ProSiteProfiles Zinc finger RING-CH-type profile. 67 127 IPR011016 GO:0008270
Phco7g02245 281 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 9 253 IPR033275 -
Phco7g02245 281 Pfam Protein of unknown function (DUF3675) 126 243 IPR022143 -
Phco7g02245 281 Pfam RING-variant domain 75 120 IPR011016 GO:0008270
Phco7g02245 281 CDD RING_CH-C4HC3_MARCH 75 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02245 Phco-Chr7 39601198 39605612 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02245 7 39601198 39605612 Phco7g02245 7 39601198 39605612 ECH