Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02219 ATGCCTAACGAACTCTCGTTGTTCCTTCTACTTCAGTTGGTTGTATTATTTGGGCAAGCTCCGGTGCTTTCTCCGCCTCCTCTCCTCCGGTCAATCTCCGGAAAATTTACGGTCGATATCCGGCAACTCTCCGGTCAACATCCGGAAAGCCTCCGATCATTCTACGGTAGGGTAGAGAAATTGGGAACAATGAGTGAGGTGTTTGATGGGTATGAGCGTCAATACTGTGAACTATCAGCGAATCTTTCGCGGCAATGCACTGCGGCTTCTGCTCTTGATGGAGAACAAAAGAAGCAGAAACTTTCTGATATAAAAGCTGGATTAGATGATGCTGACACATTGATTCGGAAAATGGACCTTGAGGCTAGGAGTTTGCAGCCAAGTATGAAGGCAACTCTTCTTGCCAAGTTAAGGGAATATAAAACTGATTTAAACAATTTGAAGACCGAAGTTAAAAGAGTTACAACAACTAATGTCAGTTTCGCTGCTAGAGATGACTTGTTGGAATCGGGAAGTGCTGATACACTGGCGGTATCAAATGATCAAAAGGGAAGACTTCTGATGTCTACTGAAAGACTTAATCAGTCCTCTGATAGAATAAAGGATAGCAGAAAAACAATGCTGGAGACAGAGGAACTTGGTGTCTCTATCCTCCAAGACTTACATCAACAACGTCAATCCCTACTCCATGCCCATAAGACACTCCATGGGGTGGATGATAACATTAGCAAGAGCAAGAAGATTTTGTCAGCCATGTCAAGAAGGATGAGCAGGAACAAATGGATTGTAGGCTCCTTATTGACAGCTATGGTCCTTGCAATTATAATCATTTTATATTTCAAGCTGACTCATTAG 855 0.4281 MPNELSLFLLLQLVVLFGQAPVLSPPPLLRSISGKFTVDIRQLSGQHPESLRSFYGRVEKLGTMSEVFDGYERQYCELSANLSRQCTAASALDGEQKKQKLSDIKAGLDDADTLIRKMDLEARSLQPSMKATLLAKLREYKTDLNNLKTEVKRVTTTNVSFAARDDLLESGSADTLAVSNDQKGRLLMSTERLNQSSDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHKTLHGVDDNISKSKKILSAMSRRMSRNKWIVGSLLTAMVLAIIIILYFKLTH 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02219 284 FunFam Vesicle transport through interaction with t-SNAREsB 180 260 - -
Phco7g02219 284 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 64 279 - -
Phco7g02219 284 Pfam Vesicle transport v-SNARE protein N-terminus 75 153 IPR007705 GO:0006886|GO:0016020
Phco7g02219 284 Pfam Snare region anchored in the vesicle membrane C-terminus 191 256 - -
Phco7g02219 284 SUPERFAMILY t-snare proteins 69 155 IPR010989 GO:0016020|GO:0016192
Phco7g02219 284 Coils Coil 130 157 - -
Phco7g02219 284 CDD SNARE_Vti1 190 250 - -
Phco7g02219 284 Gene3D - 62 160 IPR038407 -
Phco7g02219 284 Gene3D - 180 260 - -
Phco7g02219 284 FunFam Vesicle transport through interaction with t-SNAREs homolog 1A 64 162 - -
Phco7g02219 284 SUPERFAMILY SNARE fusion complex 193 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02219 Phco-Chr7 39173465 39178995 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02219 7 39173465 39178995 Phco7g02219 7 39173465 39178995 ECH