Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02212 ATGGCTCTCTTCCGCAGGTTCTTTTACCGGAAACCACCAGATCACCTCCTCGAGATCTCCGACAGACTCTATGTTTTTGATTGTTGCTTCTCCAAGAATGTGTTGGAGGAAGAGGAGTACAAGGTTTATATTGGGGGGGTTGTGGCTCAGCTTCAGGATCACTATCCGGATGCTTCTTTCATGGTGTTCAATTTCAGAGAAGGGGATAGGCGCAGTCGAATTTCAGACATAATGTCTCAGTATGAGATGACAGTTATGGAGTACCCGCGGCAATATGAGGGTTGTCCCCTTTTGCCATTGGAGATGATTCACCACTTCCTTCGGTCAAGTGAGAGCTGGTTGTCTTTGGAGGGAAAACAAAACGTGCTTTTGATGCACTGTGAAAGGGGTAGTTGGCCTGTGCTTGCGTTTATGCTAGCTGCTCTTCTGTTGTACAGGAAACAGTACAATGGGGAACACAAGACTCTTGAAATGGTGTACAAGCAAGCACCTAGAGAACTTCTCCACCTTCTATCCCCTTTGAATCCACAACCTTCTCATTTGAGATATCTTCAGTACATTTCCAGGAGGCATTTGGGTTCTCAGTGGCCTCCATCAGAAACACCCTTATATTTGGATTGCATTATTGTCAGGGTCCTTCCATTGTTTGACGGTGGAAAAGGATGCAGACCGGTTGTGCGTGTCTATGGTCCAGACCCTTCAAAACCTTCCAACAGAAGTTCTAAGCTTCTTTCCTCAACTTCAATGGGCCAAAATCATGTTCGCCACTACTTGCAGGCAGAATGTAGGCTCGTGAAAATTGACATCCGTTGTCATGTTCAAGGGGACGTGGTTCTTGAGTTCATACATTTAAGTGATGACTTTGTTCGTGAGGAGGTGATGTTCAGAGTCATGTTTCATACTGCGTTTGTACGGTCAAATATATTGACGCTGAGCCGTGATGAAATTGATATTCAGTGGGATGCAAAGGATCAGTTCCCCAAGGACTTCAAATTTGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTAATCTAAACACAGAAGATGCAAGTGACACAGAATGTGCTTCACCTGAGGCTGAGGAATTCTATGAAGCAGAAGAGATCTTCAGCAATGTAATTGATGCTATGGAAGGTAAGGGAGATTACGATTTTCCAATGGACAGTGTAGTAGATGATGGAAGTCATAAAGAGATCTGGAAAGAGTATTCAGATCCTCGTACTTTTCTGGATTCCCTGTTAGATGATGGGATTCACCAACAGGTTGATGATGCAAGGTACAAGCTTGACAAGAGGGTGGTTTTAGATACTCATGCTGTCAAAGATATTGGAGTGGATTATGGGATAACTTTTATGACAAAGGGAGTCACTGTGAATGCTCATGATAAGTTGGCAGTTATGCAAAACAAATATGATGAAGATAACAATGAAACAGAAAAAGGGTTGCAGGTGCTTCATATTTCCAGACCAAAATCGGATAAATTACTTATTTCTTCTGAAAAGAAACAACTTCCTACAAACTCAAAGCCCATGGGCGATTCATTTGTAGCAAATCAAAAGACTAAACTCCAAGAACCACATGATTTTCAGGCAAATCATGCAAAACTCAATGCAACAACTAGGTCGGTTCCTTCTAGTAAGGATTCTTTTCAAGATTCCATGCCTGTCTCATATCCACCATCAAGGAACAATAGTTCACCACTTACATTGTCACATGTTACCTCTGAAAAGGACGAAACCACTGATGCCAAAGGAAAATCTACTTCTAGTTCTCATGTCTCTGAAGCAATTGTTTTTATGGACACGATAAATGACCTGAAAAGCTGTGATGGTGATAACTCTAAATCTTCGGACCCTGTAACTGAAATAGGCTCAAACTCTCCACTATCATCATTACTGTCAGTCAAAGAGACATATCTTCAGTTAGCTAATCAAGCACCACAACAGAGCTATGATCAAATGTTACAACATCCTCCACCTCCACCTCCACCTCCACCTCCTCCACCTCCAATTTTTGGGCAAAATAGAGGGAGCATTATGACTCCTACCCATTGGAAATCTGTTGGACAAAATAATGGGGCTTTACCTCCTTCTCCCCCTACTCCTCCCACTGCAAATGCTGTAATTACATCTAAAGTTTCACTACCACCACCACCACCTCCTCCCCCTCCCCCTCCGCCCCCTCCTTTGCAGTCTACAAATGGATCTCCACTCCCTTCTCCCTCAATGTCTCCAACAAAGTTTAAAGCTCCACCTCCTGCACCACCACCACCACATTATCCTCCACCTCCTTTAAGTAAATCTACACCACTTCCTCCTCCTCCTTTCAGTAATGCTCCACCAGCACCACCACCTCCTCCTCCTTTAAGTACTGCACCACCACCACCACCACCTCCTCCTCCTTCTCTATCCAGAGCTTCACCTCCACCACCACTTCTTCCTCCATCAAGTGGAGCACCACCTCCACCACCATCTTCTTCACTGTCCAGAGGTCCACCTCCCCCACCTCCTCCAAATCGTGGACCACCACCAACAACAATGCCTGGAGGCACAACTCCTCCACCACCTCCAGGTGGTCGAGGCCCACCTCCTACTGGAATGCGGGCTCCTCTTGCTCATTCTCCTCATGGACCTCTAAGCGGTGCTCCTTTTCCTTCACCAACTGGAACTGATACAAGAGGGAGAGGTCGTGGACTTGGACGTCCTACAGGGGCTGGTGCAATGGCAACTCGGAAATCCTCCTTAAAGCCTCTGCATTGGAGTAAGGTAACAAGGGCATTGCAAGGAAGTTTATGGGATGAACTACAAAGACGTGGAGAACTTCAAATAACACAAGAGTTTGACGTTTCAGAGATAGAGAAGCTTTTTTCTGCAAATGTTGGAAAACCTGCTGATTCAGATGGTAAATCTGGTGGGCGGCGCAAATCTGTTGGATCCAAAACTGACAAAATCCAATTGATTGACCTAAGGAGGGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCTCTTCCTGATATGATGGCTGCAGTACTGGCTATGGATGATTCCGTGCTAGATGTTGATCAGGTGGAAAATCTCATTAAATTTTGTCCAACCAAAGAGGAGATAGAGCTTTTAAAGGGATACACCGGTGATAAGGAGAATTTGGGGAAGTGTGAAAAGTATTTTTCGGAGCTGATGAAAGTGCCAAGAGTGGAATCAAAACTTAGAGTATTCTCTTTCAAAATTCAGTTTGGGACTCAGATTACAGAGTTTAAGAAGAGCTTACACACAGTAAACTCTGCTTGTGAAGAGGTCCGAAACTCATTCAAACTAAAGGAGATCATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGTTAGATAGTCTCTTAAAACTAACCGACACTCGTGCTTCAAATAGTAAAATGACACTCATGCATTTTCTTTGCAAGGTCCTAGCTGAAAGGTTTCCTGGACTCCTTGATTTTCACCTTGACCTTGTTAGCTTGGAAGCAGCCACTAAGATACAATTGAAGTCTTTAGCAGAAGAAATGCAAGCAATCATCAGGGGATTAGAAAAGGTTAAACAGGAGCTTGCTGCATCTGAACACGATGGCCCCGTGACTGAAGTTTTTCGTAAGACATCGAAGGAATTCATTGCTGTTGCAGGGTCAGAGGTGGCATCTGTAACAAACCTATATTCTGTGGTGGGTAGAAATGCAGATGCACTTGCCCTATATTTCGGTGAGGATCCTGCACGTTGTCCTTTCGAGCAAGTTACTGCAACTCTCTTGAATTTCACAAGGTTGTTTCTGAAGGCACATGAAGAGAATTGCAAACAAACAGTGTTAGAGAAAAAGAAAGCTGATAAAGAGGCTGAAATGGAGAAGGCTAAAGGAATTAACTTCATAAGGAAGAGTGGAAAAGATGAAGAAGAAGAAAGTTGA 3978 0.4377 MALFRRFFYRKPPDHLLEISDRLYVFDCCFSKNVLEEEEYKVYIGGVVAQLQDHYPDASFMVFNFREGDRRSRISDIMSQYEMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGKQNVLLMHCERGSWPVLAFMLAALLLYRKQYNGEHKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRHLGSQWPPSETPLYLDCIIVRVLPLFDGGKGCRPVVRVYGPDPSKPSNRSSKLLSSTSMGQNHVRHYLQAECRLVKIDIRCHVQGDVVLEFIHLSDDFVREEVMFRVMFHTAFVRSNILTLSRDEIDIQWDAKDQFPKDFKFEVLFLDADAVIPNLNTEDASDTECASPEAEEFYEAEEIFSNVIDAMEGKGDYDFPMDSVVDDGSHKEIWKEYSDPRTFLDSLLDDGIHQQVDDARYKLDKRVVLDTHAVKDIGVDYGITFMTKGVTVNAHDKLAVMQNKYDEDNNETEKGLQVLHISRPKSDKLLISSEKKQLPTNSKPMGDSFVANQKTKLQEPHDFQANHAKLNATTRSVPSSKDSFQDSMPVSYPPSRNNSSPLTLSHVTSEKDETTDAKGKSTSSSHVSEAIVFMDTINDLKSCDGDNSKSSDPVTEIGSNSPLSSLLSVKETYLQLANQAPQQSYDQMLQHPPPPPPPPPPPPPIFGQNRGSIMTPTHWKSVGQNNGALPPSPPTPPTANAVITSKVSLPPPPPPPPPPPPPPLQSTNGSPLPSPSMSPTKFKAPPPAPPPPHYPPPPLSKSTPLPPPPFSNAPPAPPPPPPLSTAPPPPPPPPPSLSRASPPPPLLPPSSGAPPPPPSSSLSRGPPPPPPPNRGPPPTTMPGGTTPPPPPGGRGPPPTGMRAPLAHSPHGPLSGAPFPSPTGTDTRGRGRGLGRPTGAGAMATRKSSLKPLHWSKVTRALQGSLWDELQRRGELQITQEFDVSEIEKLFSANVGKPADSDGKSGGRRKSVGSKTDKIQLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDDSVLDVDQVENLIKFCPTKEEIELLKGYTGDKENLGKCEKYFSELMKVPRVESKLRVFSFKIQFGTQITEFKKSLHTVNSACEEVRNSFKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHFLCKVLAERFPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIRGLEKVKQELAASEHDGPVTEVFRKTSKEFIAVAGSEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFTRLFLKAHEENCKQTVLEKKKADKEAEMEKAKGINFIRKSGKDEEEES 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02212 1325 ProSiteProfiles Formin homology-2 (FH2) domain profile. 906 1307 IPR015425 -
Phco7g02212 1325 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Phco7g02212 1325 MobiDBLite consensus disorder prediction 714 736 - -
Phco7g02212 1325 MobiDBLite consensus disorder prediction 538 575 - -
Phco7g02212 1325 Gene3D Protein tyrosine phosphatase superfamily 13 206 IPR029021 -
Phco7g02212 1325 SMART PTEN_C2_2 198 338 IPR014020 -
Phco7g02212 1325 Coils Coil 1188 1212 - -
Phco7g02212 1325 MobiDBLite consensus disorder prediction 961 980 - -
Phco7g02212 1325 Pfam Formin Homology 2 Domain 911 1281 IPR015425 -
Phco7g02212 1325 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Phco7g02212 1325 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 188 IPR029021 -
Phco7g02212 1325 MobiDBLite consensus disorder prediction 677 695 - -
Phco7g02212 1325 Gene3D - 207 336 - -
Phco7g02212 1325 MobiDBLite consensus disorder prediction 655 674 - -
Phco7g02212 1325 SMART it6_source 473 1325 IPR015425 -
Phco7g02212 1325 Coils Coil 1282 1302 - -
Phco7g02212 1325 MobiDBLite consensus disorder prediction 610 629 - -
Phco7g02212 1325 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Phco7g02212 1325 PANTHER FORMIN-J 820 1305 - -
Phco7g02212 1325 Gene3D Formin, FH2 domain 907 1292 IPR042201 -
Phco7g02212 1325 MobiDBLite consensus disorder prediction 745 865 - -
Phco7g02212 1325 SUPERFAMILY Formin homology 2 domain (FH2 domain) 834 1300 - -
Phco7g02212 1325 MobiDBLite consensus disorder prediction 649 914 - -
Phco7g02212 1325 MobiDBLite consensus disorder prediction 538 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02212 Phco-Chr7 39058216 39074841 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02212 7 39058216 39074841 Phco7g02212 7 39058216 39074841 ECH