Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02180 ATGGTAACTGCAAATGAGAGGGTCGTCGCTGTGATCATGGTTGGAGGACCCACTAAAGGTACTAGATTCCGGCCATTGTCATTCAACGTGCCCAAGCCACTGTTTCCATTAGCAGGACAACCAATGGTTCATCATCCAATTTCTGCTTGTAAAAGGATTCCTAATTTGGCTCAGATTTATCTGCTTGGTTTCTATGAGGAACGTGAATTTGCCTTATATGTATCTTCTATTTCAAATGAGCTTAAAGTCCCTGTTAGATACTTGAAGGAAGACAGACCACATGGTTCGGCTGGTGGCCTTTATCACTTTAGAGATCTGATCATGGAAGACGATCCGTCGCATATCTTCTTGCTGAACTGTGATGTATGCTGCAGTTTTCCACTGCCAGAAATGCTGGATGCTCACAAAAGATATGGTGGGATGGGAACAATACTAGTTGTGAAGGTTTCTGCCGAATCAGCGAGCGAGTTTGGGGAGTTAGTTGCTGATCCAACAACTAATGAACTATTGCATTATACAGAGAAACCCGAAACTTTTGTAAGTGATCGTATAAACTGTGGAGTGTACATATTTACACCAGATATCTTCACAGCCATCGAGGGTGTTTCCACTCAGCGGAAAGACAGAGCTAACCTAAGACGTGTTTCCAGCTTTGAAGCAATGCAGCCAGATCCAAGGACACTTCCAGCAAATTATGTCAGACTGGATCAAGATATCCTTTCACCTCTTGCGGGGAAGAAACAGTTGTATATTTATGAAACCAATGACTTTTGGGAACAAATCAAAACTCCAGGAATGTCCATAAAATGTTCTGGCTTGTATCTTGCCCAATTTCGTTACACATCCCCCCATCTATTAGCAAATGGAGATGGTATTAAGAAAGCTAGCATCACTGGAGATGTCTATATTCACCCATCAGCAAAAGTGCATCCATCTGCTAAGATTGGTCCAAGTGTATCAATATCTGCAAATGCTCGTATCGGAGCCGGTGCAAGGCTAAAATGCTGTATCATCCTTGATGACGTAGAGATTAAGGAAAATGCTGTTGTTAGTCATGCAATTGTTGGATGGAAATCCTCTATTGGAAGATGGACACGTGTCCAGGCTAGTGGAGATTATAATGCAAAGCTTGGGGTAACTATACTTGGTGAATCTGTAACCGTTGAGGACGAGGTGGTGGTTTTTAATAGCATTGTTCTGCCACATAAGACCCTAAATGTGGGTGTTCAAGATGAGATTCTTTTATAG 1248 0.4223 MVTANERVVAVIMVGGPTKGTRFRPLSFNVPKPLFPLAGQPMVHHPISACKRIPNLAQIYLLGFYEEREFALYVSSISNELKVPVRYLKEDRPHGSAGGLYHFRDLIMEDDPSHIFLLNCDVCCSFPLPEMLDAHKRYGGMGTILVVKVSAESASEFGELVADPTTNELLHYTEKPETFVSDRINCGVYIFTPDIFTAIEGVSTQRKDRANLRRVSSFEAMQPDPRTLPANYVRLDQDILSPLAGKKQLYIYETNDFWEQIKTPGMSIKCSGLYLAQFRYTSPHLLANGDGIKKASITGDVYIHPSAKVHPSAKIGPSVSISANARIGAGARLKCCIILDDVEIKENAVVSHAIVGWKSSIGRWTRVQASGDYNAKLGVTILGESVTVEDEVVVFNSIVLPHKTLNVGVQDEILL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02180 415 FunFam Putative GDP-mannose pyrophosphorylase 284 412 - -
Phco7g02180 415 Pfam Nucleotidyl transferase 10 209 IPR005835 GO:0009058
Phco7g02180 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
Phco7g02180 415 FunFam Mannose-1-phosphate guanyltransferase alpha 7 278 - -
Phco7g02180 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Phco7g02180 415 Gene3D Hexapeptide repeat proteins 287 410 - -
Phco7g02180 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 414 - -
Phco7g02180 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 276 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02180 Phco-Chr7 38652492 38657525 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02180 7 38652492 38657525 Phco7g02180 7 38652492 38657525 ECH