Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02137 ATGTTCCTATTCCTGCTCACTGATGAAGTAGATTTCTTTATTATAATATGTTCTTTCACTATATATACACACACTCCTTCCTCTGTCTCTCTGCAACCGACAACCTCTGCTTCTCTTCACTTATGCCTCATTCTTAAGGAGTTTTTGTTCATGGAAGAGTTGAAGATGTCAGGAATTGTTACGAACGGGGTTCGTGATGAAGGGGAAGGTAATGAGATGAATGGGAACCATGATTCCCCTTCTAAGGAAACCTTGAGTCAGGTTAAGTCCCCCAGGGGTTCCTCGAGTCCGGGAAAAGGTGAAGGCGATACTGCTAATTTTGGTGTTGAGGGGGTGGTTGAGCCCTCCATTGAACAGCTTTATGAGAATGTGTGTGACATGCAGAGTTCGGATCAGTCACCGTCACGGCAAAGTTTTGGATCTGATGGCGATGAATCTAGAATTGATTCGGAGTTGCGCCATCTAGTTGGAGGACGGATGAGGGAGGTAGAGATAATGGAAGAGGAAGTTGGGGAGGGGAAAGGGCCAGAGAGGAGTTCAAGTAGTGAAATATCTTCTGGATTGGATGGCTTGACCAATGATAAGAAGGTGCATCAGGTGAATGAGATTCAGGAGGTTCAGCCTGCAGCTACTAGTTCTGGTTCCTCAGTAAAATCTGTCAAAGCATCGAGTTCACGGGTGGGACCTGATACTTCGCTCAAATCAACAGCCAAGGGAAAAAGTCCTCTCCCAAAACCTCCAATCGATAAAAAGAATGGTAGGCATTTGAGGAAACAAAGTAGTGGTGGTACTGGCGTGAAGAATTTGAAGAATTCTCCTCTGGGAAATAAGTCAGTGTCACAAAACCGTGTTGAGAAAAGGGCCGAGTCCGTATTAGAGAAACCAGAGAGGGCACCGTTATTACTAAAACAAGCAAGAGATATGATTTCCTTCGGGGATAATCCGCATAAGGCTCTTGACTTGGCTCTTCAAGCAATGAAACTGTTTGAGAAATTAGGTGATGGGAAACCGAGTTTGGAGCTGGTTATGTGTCTACATGTTATAGCAGCAATATATTGTAGCTTGGGTCAATATGGTGAGGCAATTCCAATTCTCGAGCGTTCAGTTGAGATTCCTGTTATTGAGGAAAGTCAACAACATGCCCTTGCTAAATTTGCTGGTCACATGCAACTCGGAGACACTTATGCTATGCTGGGCCAGCTTGAGAATTCAATTACGTGCTATAACACTGGATTAGAACTCCAGAAGCAGGTTTTGGGAGAGACAGACCCAAGGGTTGGTGAAACTTGTCGGTACGTGGCTGAAGCTAATGTTCAGGCTTTGCAATTTGATGAAGCAGAGAAGCTTTGTCAGATGGCTCTAGACATTCACAAAACAAATAACTCAGCTCCATCTCTTGAAGAGGCAGCTGATAGGAGGCTCATGGGCCTTGTATGTGATACAAAGGGAAATCACGAATCTGCTCTTGAGCATCTTGTTCTAGCCAGCATGGCAATGGTAGCTAACGGCCAGGAAGGGGATGTGGCTTCTGTTGACTGCAGCATTGGAGACACATACTTGTCTTTGTCCAGATATGATGAAGCTGTCTTTGCATATCAGAAAGCATTAACAGCTTTCAAGACCAACAAAGGAGAGAATCATCCAGCAGTGGGATTTGTCTTTGTACGTTTGGCTGATTTGTATAACAGGATAGGGAAGATAAGGGAATCAAAATCATATTGTGAGAGTGCACTTAAAATATATGAGAATCCAATTCCTGGAGTTCCTCTAGAGGAGATTGCTAGTGGTCTTACAAATATTTCAACTATCTATGAGTCTATGAATGAGCTTGAACAGGCACTCAAGTTACTGCAGAAAGCACTGGAGATATACAATGATGTCCCTGGTCAGCAAAGCACAATAGCTGGAATTGAAGCCCAGATGGGAGTCATGTACTACATGCTGGGGAAGTATTCTGAATCTTACGAAACTTTGAAGACTGCTATTTCAAAGCTTCGTGCTATTGGAGAAAAGAAATCATCTTTCTTTGGTATTGCTCTTAATCAAATGGGACTTGCCTGTGTGCAGCGGTATGCCTTAAGTGAGGCTACAGAATTATTTGAAGAAGCAAAGAGTATTTTGGAAAAAGAATATGGTCCGTATCACCCAGAAACACTTGGGGTATGTAGTAATCTTGCTGGCACATACGATGCAATTGGCAGGCTGGATGATGCAATTCAAATTCTGGAGTACGTTGTTAGCACGAGAGAGGAAAAGCTTGGGACTGCAAATCCTGAAGTGGATGATGAGAAGAAAAGGTTGGGTGAGTTGTTGAAGGAAGCAGGTAGAGTTCGGAGCAGAAAAACCAGGTCACTTGAGAACCTTCTTGATGGCAATGCTCACACTGTAAACAATGTTGTCATCAGGGCCTGA 2412 0.4366 MFLFLLTDEVDFFIIICSFTIYTHTPSSVSLQPTTSASLHLCLILKEFLFMEELKMSGIVTNGVRDEGEGNEMNGNHDSPSKETLSQVKSPRGSSSPGKGEGDTANFGVEGVVEPSIEQLYENVCDMQSSDQSPSRQSFGSDGDESRIDSELRHLVGGRMREVEIMEEEVGEGKGPERSSSSEISSGLDGLTNDKKVHQVNEIQEVQPAATSSGSSVKSVKASSSRVGPDTSLKSTAKGKSPLPKPPIDKKNGRHLRKQSSGGTGVKNLKNSPLGNKSVSQNRVEKRAESVLEKPERAPLLLKQARDMISFGDNPHKALDLALQAMKLFEKLGDGKPSLELVMCLHVIAAIYCSLGQYGEAIPILERSVEIPVIEESQQHALAKFAGHMQLGDTYAMLGQLENSITCYNTGLELQKQVLGETDPRVGETCRYVAEANVQALQFDEAEKLCQMALDIHKTNNSAPSLEEAADRRLMGLVCDTKGNHESALEHLVLASMAMVANGQEGDVASVDCSIGDTYLSLSRYDEAVFAYQKALTAFKTNKGENHPAVGFVFVRLADLYNRIGKIRESKSYCESALKIYENPIPGVPLEEIASGLTNISTIYESMNELEQALKLLQKALEIYNDVPGQQSTIAGIEAQMGVMYYMLGKYSESYETLKTAISKLRAIGEKKSSFFGIALNQMGLACVQRYALSEATELFEEAKSILEKEYGPYHPETLGVCSNLAGTYDAIGRLDDAIQILEYVVSTREEKLGTANPEVDDEKKRLGELLKEAGRVRSRKTRSLENLLDGNAHTVNNVVIRA 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02137 803 MobiDBLite consensus disorder prediction 205 292 - -
Phco7g02137 803 Gene3D Tetratricopeptide repeat domain 674 790 IPR011990 GO:0005515
Phco7g02137 803 Pfam MalT-like TPR region 438 625 IPR041617 -
Phco7g02137 803 SMART tpr_5 677 710 IPR019734 GO:0005515
Phco7g02137 803 SMART tpr_5 719 752 IPR019734 GO:0005515
Phco7g02137 803 SMART tpr_5 385 418 IPR019734 GO:0005515
Phco7g02137 803 SMART tpr_5 509 542 IPR019734 GO:0005515
Phco7g02137 803 SMART tpr_5 342 375 IPR019734 GO:0005515
Phco7g02137 803 SMART tpr_5 635 668 IPR019734 GO:0005515
Phco7g02137 803 SMART tpr_5 551 584 IPR019734 GO:0005515
Phco7g02137 803 SMART tpr_5 427 460 IPR019734 GO:0005515
Phco7g02137 803 SMART tpr_5 594 627 IPR019734 GO:0005515
Phco7g02137 803 Pfam Tetratricopeptide repeat 389 417 IPR019734 GO:0005515
Phco7g02137 803 MobiDBLite consensus disorder prediction 74 101 - -
Phco7g02137 803 MobiDBLite consensus disorder prediction 205 238 - -
Phco7g02137 803 Pfam Tetratricopeptide repeat 342 371 - -
Phco7g02137 803 Coils Coil 600 627 - -
Phco7g02137 803 MobiDBLite consensus disorder prediction 142 176 - -
Phco7g02137 803 ProSiteProfiles TPR repeat profile. 594 627 IPR019734 GO:0005515
Phco7g02137 803 ProSiteProfiles TPR repeat profile. 509 542 IPR019734 GO:0005515
Phco7g02137 803 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 106 793 - -
Phco7g02137 803 MobiDBLite consensus disorder prediction 65 107 - -
Phco7g02137 803 MobiDBLite consensus disorder prediction 126 141 - -
Phco7g02137 803 Gene3D Tetratricopeptide repeat domain 493 673 IPR011990 GO:0005515
Phco7g02137 803 Gene3D Tetratricopeptide repeat domain 280 466 IPR011990 GO:0005515
Phco7g02137 803 SUPERFAMILY TPR-like 324 755 IPR011990 GO:0005515
Phco7g02137 803 MobiDBLite consensus disorder prediction 126 191 - -
Phco7g02137 803 MobiDBLite consensus disorder prediction 258 281 - -
Phco7g02137 803 Pfam Tetratricopeptide repeat 678 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02137 Phco-Chr7 37890269 37895994 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02137 7 37890269 37895994 Phco7g02137 7 37890269 37895994 ECH