Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02121 ATGCAGTCGTTGTTGAGCGCGAAGACATGCGTGGGTATGCTGTCACCGGTTATAACGAACTCCGAGGAAAGGAGTACGAGGAGGCTGATGCAGAGCGTGAACTGTAGAAACAATAGAAATTGGAGGAATGTGGCTGTGTCGTGCGGTTCGGAGAAGAACGGGAACGAGGGAATTGGGGCGAGTGAAGAGTGGTATTCGGGTTCGTTTTTGTCTCCGAGTCACAATTACGCGATCTTGAAGCAAAGGATGGAGATAGCGGCGAAGTCCGAGTATTATGAAGAGGCTGCAAGGATTCGTGACTCGCTCAAATGCTTCGAGGACGAGGTTCCTGTTCTGCGTCTGCGGAGGTTGTTGAAAGAAGCTGTTGCTGATGAGAGATTTCAGGATGCAGCTAAATATCGTGATCGGCTCAAAGAAATTGCTCCACATTCTCTCTTAAAATGTTCAAGTGATTGTACAACCTTGGGAATTCGGGTACAAGTTAAGAGTGTATATTTAGAGGGCAGAAGTGAAGCAACAGCAGAGGAGGAATATTTCTTTGAATATAAAATAAGAATTACAAATACCACAAACCGCCCTGTTCAGCTTCTCAGAAGGCACTGGATTATAACTGATGCTAATGGAAAAACTGAAAATTTCTGGGGAATTGGGGTTTGTGGTGAACAGCCAGCTATATTTCCTAAGAGCACTTTTGAATTCTCTTCTACATGCCCTTTAAACGCACAAAATGGTAGAATGGAAGGTAACTTTGAGCTGATACACGTTGATCGAGTAGGTCCAAGAGCATTTAGCGTGGCCGTTGCCCCTTTCTCTCTCTCTCTACTTGGAGATGATGATGATGGTGGTGAAATTATCTGA 858 0.4487 MQSLLSAKTCVGMLSPVITNSEERSTRRLMQSVNCRNNRNWRNVAVSCGSEKNGNEGIGASEEWYSGSFLSPSHNYAILKQRMEIAAKSEYYEEAARIRDSLKCFEDEVPVLRLRRLLKEAVADERFQDAAKYRDRLKEIAPHSLLKCSSDCTTLGIRVQVKSVYLEGRSEATAEEEYFFEYKIRITNTTNRPVQLLRRHWIITDANGKTENFWGIGVCGEQPAIFPKSTFEFSSTCPLNAQNGRMEGNFELIHVDRVGPRAFSVAVAPFSLSLLGDDDDGGEII 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02121 285 Gene3D ApaG domain 147 278 IPR036767 -
Phco7g02121 285 Pfam ApaG domain 172 252 IPR007474 -
Phco7g02121 285 ProSiteProfiles UVR domain profile. 108 143 IPR001943 GO:0005515
Phco7g02121 285 SUPERFAMILY ApaG-like 153 273 IPR036767 -
Phco7g02121 285 ProSiteProfiles UVR domain profile. 73 108 IPR001943 GO:0005515
Phco7g02121 285 ProSiteProfiles ApaG domain profile. 151 279 IPR007474 -
Phco7g02121 285 Pfam UvrB/uvrC motif 113 140 IPR001943 GO:0005515
Phco7g02121 285 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 77 106 IPR036876 -
Phco7g02121 285 PANTHER OS05G0170800 PROTEIN 22 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02121 Phco-Chr7 37396723 37399173 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02121 7 37396723 37399173 Phco7g02121 7 37396723 37399173 ECH