Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02100 ATGAAGGCAACTCTAAGATACTTAGCAGGAATGGCAGGCCCTAGTGGTTTTGGCTCAAACTCAACCGCTGAACAAGTCACTGAAGATTCTTCTTGCTTCCTTCCTTCACCTCTAACCGCTCTCATCACTGGAGCAAGTTCTGGTATTGGAGCTGAAACAGCTAGAGTGTTGGCAAAGAGAGGAGTGAGAGTTGTGATTGCTGCAAGGGACTTGAAGAAGGCCAGGGAAGTGAAAAAGAACATACAAAAGGAGAGTCCAAAGGCTGAGGTTGTTCTGTTGGAGATTGATCTTAGCTCTTTTGGTTCTGTACAGAGATTTTGTTCCGAGTTCTTAGCTTTAGAACTTCCCCTTAATATTCTCATAAACAACGCAGGGATATTTTCTCAAAAATTGGAGTTCTCTGAGGATAAAATTGAGACCACATTTGCTACAAATTACTTAGGTCACTTTTTGTTAACAGAAATCTTACTAGACAAAATGATAGAGACGGCAGAGAAGACAGGTATTCAAGGAAGAATAGTAAACGTTTCTTCTGTCATACATAGCTGGGTGAAGAAAGATGGTTTTCGTTTCAACGACATACTCAGTGGAAAAAAGTATAATGGCACACGCGCTTATGCTCAGTCAAAATTGGCAAATATTTTGCATGCCAAGGAAATAGCCAAGCAACTCAAGGCAAGGAATGCAAGAGTAACTATCAATGCAGTACATCCAGGCATTGTGAAGACAGGAATTATTAGAGCTCATAAGGGCTTACTAACGGATTCCCTATTTTTTATCGCATCAAAGTTACTCAAAACAACATCACAGGGTGCAGCAACAACGTGTTATGTTGCTCTGAGCTCAAAAACAGAAGTCATAAGTGGAAAATACTTTGCAGATTGTAACGAGAGTAAATGCTCGAGCCTAGCAAATGACGAGTCGGAAGCACAAAAGCTATGGAACAACACCCATGCCTTGCTTCAGAAACGACTACGTCAAGCAACAATTTGA 993 0.4099 MKATLRYLAGMAGPSGFGSNSTAEQVTEDSSCFLPSPLTALITGASSGIGAETARVLAKRGVRVVIAARDLKKAREVKKNIQKESPKAEVVLLEIDLSSFGSVQRFCSEFLALELPLNILINNAGIFSQKLEFSEDKIETTFATNYLGHFLLTEILLDKMIETAEKTGIQGRIVNVSSVIHSWVKKDGFRFNDILSGKKYNGTRAYAQSKLANILHAKEIAKQLKARNARVTINAVHPGIVKTGIIRAHKGLLTDSLFFIASKLLKTTSQGAATTCYVALSSKTEVISGKYFADCNESKCSSLANDESEAQKLWNNTHALLQKRLRQATI 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02100 330 Pfam short chain dehydrogenase 39 180 IPR002347 -
Phco7g02100 330 CDD retinol-DH_like_SDR_c_like 39 314 - -
Phco7g02100 330 PRINTS Glucose/ribitol dehydrogenase family signature 115 126 IPR002347 -
Phco7g02100 330 PRINTS Glucose/ribitol dehydrogenase family signature 165 181 IPR002347 -
Phco7g02100 330 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Phco7g02100 330 PRINTS Glucose/ribitol dehydrogenase family signature 206 225 IPR002347 -
Phco7g02100 330 PRINTS Glucose/ribitol dehydrogenase family signature 39 56 IPR002347 -
Phco7g02100 330 PANTHER RETINOL DEHYDROGENASE 14 320 - -
Phco7g02100 330 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 225 IPR002347 -
Phco7g02100 330 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 115 126 IPR002347 -
Phco7g02100 330 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 179 IPR002347 -
Phco7g02100 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 298 IPR036291 -
Phco7g02100 330 Coils Coil 64 84 - -
Phco7g02100 330 Gene3D - 35 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02100 Phco-Chr7 36895495 36898693 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02100 7 36895495 36898693 Phco7g02100 7 36895495 36898693 ECH