Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02086 ATGGCGAGAGGGGAGAGAGCAGAGACGGAGAGTGGGGCGTCGTTGCCGTCGGTGGGTACGGACGCCAAGAAGCGGAGAGTGACGTATTTCTACGAACCCTGCATCGGCGACTACTACTACGGTCAAGGACACCCAATGAAGCCACACCGCATTCGCATGGCCCACAACCTCATCGTGCACTACGGTCTCCACCGCCGAATGCAGGTTAACCGTCCCTTTCCCGCGGCGGAGGCGGACATCGGCCGCTTCCACTCCGATGACTACGTCGAGTTCCTGTCCTCCGTTTCGCCGCAAATCCTATCCGAGAACTCCCACTCCCACTACCGCCAGCTCAAGCGCTTCAACGTCGGGGAGGATTGCCCAGTCTTCGACGGCCTCTTCGACTTCTGTCGCGCTTCCGCCGGCGGCTCCATCGGCGCCGCCGTACGCCTCAACCGCGCCGACGCCGACATCGCTATCAACTGGGCCGGCGGCCTGCACCACGCCAAGAAGGCAGAGGCGTCCGGTTTCTGCTACGTCAACGACATTGTTCTCGGCATTCTTGAACTTCTCAAAGTTCATAGGCGTGTGCTGTATATTGATATTGATGTTCACCATGGAGATGGGGTCGAGGAGGCATTTTACACTACTGATAGGGTCATGACAGTGTCATTTCACAAGTTTGGGGATTTTTTCCCAGGAACTGGGCACATGAAAGACACTGGGGTGGGTGCTGGAAAGAATTATTCTCTAAATGTCCCACTCAATGATGGATTGGATGATGAGACTTTCCGTGGTCTGTTTCGCCCCATCATTCAGAAAGTCATGGATGTTTATCAACCGGATGCAGTTGTTCTTCAGTGTGGTGCTGACTCCTTGTCTGGTGACCGGTTAGGTTGCTTCAACTTGACTGTGAAGGGTCATGCAGATTGCCTTCGTTTCCTTAGATCATTCAATGTTCCTCTAATGGTATTGGGTGGGGGAGGATATACAGTTCGGAATGTTGCTCGTTGTTGGTGTTATGAGACCGCGGTGGCAGTAGGAGTGGAGCCTAATCCGAAGTTGCCTTACAATGAATATTATGAATATTTTGGTCCAGACTACACTCTTCATCTCGAGCCATCCAACATGGAAAACCTAAATGCACCCAGGGATCTGGAAAAAATTCGGAATGCATTACTGGAACAACTTTCCAGGCTTCCCCATGCACCCAGTGCACCTTTTCAAACAACACCATCAATCATACAAGCTCCTGAAGAGGAAGAGGAGCACATGGATATCAGACCAAAACGTCCCATATGGAGTGGAGAAGATTTTGATTCTGATAACGATGATGACATGGCTAGTTCAAAGAACTCTGTTTTAACTGCCCAAACGAGCAGCAGGTGTGGTGCAGATGTGATGGACGAAGATTAA 1395 0.5154 MARGERAETESGASLPSVGTDAKKRRVTYFYEPCIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMQVNRPFPAAEADIGRFHSDDYVEFLSSVSPQILSENSHSHYRQLKRFNVGEDCPVFDGLFDFCRASAGGSIGAAVRLNRADADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHMKDTGVGAGKNYSLNVPLNDGLDDETFRGLFRPIIQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLTVKGHADCLRFLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPNPKLPYNEYYEYFGPDYTLHLEPSNMENLNAPRDLEKIRNALLEQLSRLPHAPSAPFQTTPSIIQAPEEEEEHMDIRPKRPIWSGEDFDSDNDDDMASSKNSVLTAQTSSRCGADVMDED 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02086 464 PIRSF HDAC_I_euk 8 462 IPR003084 GO:0004407|GO:0016575
Phco7g02086 464 MobiDBLite consensus disorder prediction 441 456 - -
Phco7g02086 464 MobiDBLite consensus disorder prediction 411 464 - -
Phco7g02086 464 PRINTS Histone deacetylase superfamily signature 274 284 IPR000286 -
Phco7g02086 464 PRINTS Histone deacetylase superfamily signature 189 204 IPR000286 -
Phco7g02086 464 PRINTS Histone deacetylase superfamily signature 157 180 IPR000286 -
Phco7g02086 464 SUPERFAMILY Arginase/deacetylase 25 392 IPR023696 -
Phco7g02086 464 CDD HDAC_classI 30 339 - -
Phco7g02086 464 FunFam Histone deacetylase 23 404 - -
Phco7g02086 464 MobiDBLite consensus disorder prediction 411 431 - -
Phco7g02086 464 Gene3D Histone deacetylase domain 16 405 IPR037138 -
Phco7g02086 464 PANTHER HISTONE DEACETYLASE 2-RELATED 15 352 - -
Phco7g02086 464 Pfam Histone deacetylase domain 44 337 IPR023801 -
Phco7g02086 464 PRINTS Histone deacetylase signature 46 63 IPR003084 GO:0004407|GO:0016575
Phco7g02086 464 PRINTS Histone deacetylase signature 114 131 IPR003084 GO:0004407|GO:0016575
Phco7g02086 464 PRINTS Histone deacetylase signature 176 192 IPR003084 GO:0004407|GO:0016575
Phco7g02086 464 PRINTS Histone deacetylase signature 235 248 IPR003084 GO:0004407|GO:0016575
Phco7g02086 464 PRINTS Histone deacetylase signature 252 270 IPR003084 GO:0004407|GO:0016575
Phco7g02086 464 PRINTS Histone deacetylase signature 79 97 IPR003084 GO:0004407|GO:0016575
Phco7g02086 464 PRINTS Histone deacetylase signature 135 155 IPR003084 GO:0004407|GO:0016575
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02086 Phco-Chr7 36588821 36593403 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02086 7 36588821 36593403 Phco7g02086 7 36588821 36593403 ECH