Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02082 ATGGCCTCAGCTTCGCAAAAGGCGACGCCACCACCACCGCCGTCGCCGTCCTCTTCTTGTTGTTCCGCCGCCGCCGACTCCACCGCCATTCCCCGCGCCGCCGCCCCGCCGCAAGACTGGACCGCCGCCACCGACGTCCCTCTCATTCGTCCCGTCGATTCCTCCGCAAATGTCTCTCCTGCCAAGGGAGTCACTGCAATGCCAAGGCCCCAGTCCAGCCACCCTTTGGACCCTTTAACTGCTGCTGAAATATCTGTGGCCGTGGCAACTGTGAGGGCCGCTGGAGCTACTCCAGAGCTTAGAGATAGTATGCGCTTCATTGAAGTAGTTTTACTGGAGCCCGATAAAAATGTTGTTGCACTAGCAGATGCATATTTCTTTCCACCTTTCCAACCATCATTACTTCCCAGAACTAGAGGAGGACCTCTAATTCCAACTAAACTCCCTCCAAGATGTGCTAGACTTGTTGTTTACAATAAGAAATCTAACGAGACTAGTATATGGATTGTTGAGTTGTCACAAGTACATGCAGTAACTCGAGGTGGCCATCACCGAGGAAAAGTAATTGCATCACATGTTGTTCCTGATGTTCAACCTCCAATGGATGCTGAGGAATATGCAGAATGTGAGGCTGTAGTCAAAAGTTTTCCCCCATTTATAGAGGCTATGAAGAAAAGGGGTATTGAAGACATGGACCTTGTAATGGTCGATCCCTGGTGTGTTGGTTATTATAGTGAAGCAGATGCTCCTGGGAGAAGACTTGCCAAGCCCCTCCTATTTTGTCAATCTGAGAGTGACTGCCCCATGGAAAATGGCTACGCCCGCCCAGTTGAGGGCATCTATGTTCTAGTTGATATGCAAAACATGGTGGTGATAGAGTTTGAAGATCGTAAACTTGTTCCCCTTCCACCAGTTGATCCCTTGAGGAATTATACTCCTGGTGAAACCAGAGGTGGCTCTGATAGAAGTGATGTAAAACCGTTGCAAATTATTCAGCCTGAAGGTCCAAGCTTCCGTGTCAATGGGTATTTTGTTGAATGGCAGAAGTGGAATTTTCGTATTGGATTCACACCCAAAGAAGGTTTGGTTATATATTCTGTTGCATATGTTGATGGTAGTCATGGGCGAAGGCCTGTTGCTCACAGGATGAGTTTTGTGGAGATGGTTGTTCCCTATGGAGACCCGAACGAACCACATTATAGGAAAAATGCTTTTGATGCTGGGGAAGATGGCTTGGGAAAAAATGCACATTCCCTCAAGAAGGGATGTGATTGTTTGGGCTACATCAAGTATTTTGATGCTCACTTCACTAATTTCACTGGTGGGGTGGAAACAATAGAAAATTGTGTATGTTTACATGAAGAGGATCACGGAATTCTCTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGATCTAGAAGACTTACTGTTTCTTTCATGTGTACTGTGGCTAATTACGAGTACGGATTTTTTTGGCACTTTTATCAGGATGGAAGGATTGAAGCTGAAGTCAAGCTAACTGGAATTCTTAGCCTAGGAGCCTTGCTGCCTGGAGAGTTTCGAAAATATGGAACCATGATTGCACCTGGTCTATATGCACCAGTTCATCAGCACTTTTTTGTTGCTCGTATGGACATGTCTGTTGATTCTAAACCAGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATATGAAAGTTGAGGAACCAGGTGAGAATAATGTTCATAACAATGCTTTCTATGCCGAAGAGACTTTGCTCAGATCTGAATTGGAAGCCATGCGTGATTGTAATTCTTTGACTGCACGACATTGGATTGTAAGGAACACAAGAACATGCAATAGAACTGGCCAGTTGACAGGATACAAGCTGGTTCCTGGCTCAAACTGCTTACCATTGGCAGGCTCGGAAGCCAAGTTTTTAAGACGAGCTGCTTTCTTGAAGCATAATTTTTGGGTAACAACATATTCACGTGATGAGATGTTTCCTGGAGGAGAATTTCCAAATCAAAATCCGCGTGATCGTGAAGGACTAGCTACATGGGTTAAACAGAACCGATCTTTGGAAGAAACTAATATAGTTCTTTGGTATGTATTTGGAATCACACATGTTCCTCGTTTGGAAGACTGGCCTGTTATGCCAGTAGAGCACATTGGTTTTATGCTCACGCCTCATGGATTCTTCAATTGTTCCCCTGCAATCGATGTCCCACCTAATGCATGTGAAATGGATTCTAAAGATAATGAAATTAAGGATAATGGTTCTTCGAAGCCAATTCAGAGTGGGTTAACGGCAAAGCTTTAG 2313 0.4509 MASASQKATPPPPPSPSSSCCSAAADSTAIPRAAAPPQDWTAATDVPLIRPVDSSANVSPAKGVTAMPRPQSSHPLDPLTAAEISVAVATVRAAGATPELRDSMRFIEVVLLEPDKNVVALADAYFFPPFQPSLLPRTRGGPLIPTKLPPRCARLVVYNKKSNETSIWIVELSQVHAVTRGGHHRGKVIASHVVPDVQPPMDAEEYAECEAVVKSFPPFIEAMKKRGIEDMDLVMVDPWCVGYYSEADAPGRRLAKPLLFCQSESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPVDPLRNYTPGETRGGSDRSDVKPLQIIQPEGPSFRVNGYFVEWQKWNFRIGFTPKEGLVIYSVAYVDGSHGRRPVAHRMSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLTVSFMCTVANYEYGFFWHFYQDGRIEAEVKLTGILSLGALLPGEFRKYGTMIAPGLYAPVHQHFFVARMDMSVDSKPGEALNQVVEVNMKVEEPGENNVHNNAFYAEETLLRSELEAMRDCNSLTARHWIVRNTRTCNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNFWVTTYSRDEMFPGGEFPNQNPRDREGLATWVKQNRSLEETNIVLWYVFGITHVPRLEDWPVMPVEHIGFMLTPHGFFNCSPAIDVPPNACEMDSKDNEIKDNGSSKPIQSGLTAKL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02082 770 Pfam Copper amine oxidase, N3 domain 199 302 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Phco7g02082 770 MobiDBLite consensus disorder prediction 1 42 - -
Phco7g02082 770 FunFam Amine oxidase 58 201 - -
Phco7g02082 770 Gene3D - 56 201 - -
Phco7g02082 770 FunFam Amine oxidase 204 307 - -
Phco7g02082 770 Pfam Copper amine oxidase, N2 domain 74 161 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Phco7g02082 770 Gene3D Copper amine oxidase, catalytic domain 315 741 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Phco7g02082 770 FunFam Amine oxidase 318 743 - -
Phco7g02082 770 SUPERFAMILY Amine oxidase catalytic domain 322 741 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Phco7g02082 770 Gene3D - 203 306 - -
Phco7g02082 770 MobiDBLite consensus disorder prediction 748 770 - -
Phco7g02082 770 SUPERFAMILY Amine oxidase N-terminal region 72 199 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Phco7g02082 770 SUPERFAMILY Amine oxidase N-terminal region 198 316 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Phco7g02082 770 PANTHER COPPER AMINE OXIDASE 70 752 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Phco7g02082 770 Pfam Copper amine oxidase, enzyme domain 328 737 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02082 Phco-Chr7 36392998 36400149 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02082 7 36392998 36400149 Phco7g02082 7 36392998 36400149 ECH