Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02074 ATGTTGAGGCTTTACGTGTGTATTTTGGAGGCCAAGGACCTTCCCGTGAAGGATACATACGTGAAGCTTAGAATTGGCAAGTTCAAGGCCAAGACAAGGATTTTGACGAACAAGTGCACCCCCATTTGGAACCAGGAGTTTTGTTTCAGGGTGCATGATGCTGAGAACGTGCTCGTTGTGTCTGTTGTTAGTCATGTGAATGAGTGCAGGGTGACCAATGGTTATGTGGGTTTCGTGGGTGAGGTACGGATACCTGTAGCCTCAATTTCTTTTGAGGATAACCAAACCTTGCTGCCCACCTGGTTCTCTCTTCAAAGCCCCAAGACTGGGAAATTTTTCAATAAATATTGTGGGAAAGTTCTCCTTACTGTTTCTCTTCAAGGTAAATGCTGTGCTTCTTTTACCAAGCATAAGCATCCTCCAAATTCAACTTTTGCAGTTGAGAACTCAAAAGACTTGGAATGTCTTCACACTTCATGTCGGGCACCTTGTGATAAAATGGGTATAGGCAAACAGTTGAAGGTTATTGCTAATGTTGTGCATAAGATTTTCAAAAAGAAAGAAGGAAACTCAAAGCCCGGGGATTCTTCAGAACTATCAACTATGTTATCTGATTTTGAAGACAGTGTTCAGGAAGATTCATCTCCTTGCAGTTTTGAAGAAGCCGTTGCACTAATGGAATTAGGAGATAGCAAACCTGAGATGCCTGAAAATTTGTCTGGCGGTGTTTTAGTAGATCAGATTTATTTAGTCTCTCCAAGTGACCTTAATGTGTTTCTTTTTGCACCCAATTCTCGGTTTTGTAAAGATTTGGCTGAACTGCAGGGAACAACAAATGTGCAAGAGGGACCTTGGACATGGAAAAATGGAGACATGTCAAGTTTAACACGAGTTGTTTCCTATACAAAAGCTGCAACAAAATTGATTAAGGCAGTCACTGCCACTGAGGAGCAAAAGTACATTAGAGTGTGCAGAAAGGAATTTGCTATATTTGTTAGTGTAAGCACACCAGAGGTCCCATATGGGAATACATTTAGGATTGAATTGCTTTACAAGATAATGCCTGGTGGAGAGGTATCTTCAGGAGAGGAATCCTCCCATCTTGTTGTGTCATGGAGCATTGTCTTCCTCCAAAGCACAATGATGAAAGGCATGATAGAAAGTGGGGCAAGACAGGGATTGAAGGAGAGTTTTAGCCTGTTCTCCGAAAAACTAGCGCAGAATTTTAAGGTGCAAGATAAGGCAAATTTTCCAGACAAGGAACATTTTTTAGCAACTTTGCAAACTGAAGACCAGTGGTATTGGTGGCAGGCAATTACATACTTTTGTAATTTCACTGTGGTTTCCACCATTTTCATGTGTTTGTATGTGATGGTGCATATTTTATATTGTGGTCCAAGTCTACCTCAGGGCTTGGAATTTAGGGGGCTTGAATTGCCAGATAGTTTTGGGGAACTCATTATAAGTGGAGTTTTAATCACCCAGTTGCAGCGTGTTTATAATATGCTGTCTCACTTTGTTCAAGCAAGATTTCAAATGGGAACTGACCATGGCCTCAAAGCTCATGGTGTTGGATGGGTTCTTACAGTGGCTTTAATTGAGGGGGTTGACTTGGCCTCCTTGGAATCAGAAGGGTTGTCAGATCCCTACGTAGTTTTCACTTGTAATGGACAAACAAGATCAAGCTCTGTCAAGCTTCAAACTTCGAATCCTCAATGGAATGAAATATTAGAGTTTGATGCTACGGAAGAACCACCATCAGTTTTGGATGTGGAAGTTTTTGATTTTGACGGTCCATTTGACCAGGATGTTTCACTTGGACATGCTGAGATCAATTTCCTAAAGCACACATCAACTGAGTTGGCAGACATGTGGCTCTTGCTCGAAGGAAAACTTGCTCAATCTTCTCAGTCAAAGTTGCACCTGAGAATTTTCTTGGACAATAATAAAGGAGTTGAGACAATCAAGGAATATTTGGAGAAGATGGAAAAGGAAGTAGGCAAAAAGTTGAATCTTAGATCACCACAAAGGAATTCTACATTCCAGAAATTGTTTGCATTACCTCCGGAAGAATTTCTCATAAAAGATTTCACTTGTTACCTCAAGAGAAAAATGCCTTTACAGGGTCGGCTGTTTCTTTCAGCAAGGATTCTGGGGTTTCATGCCAATTTCTTTGGACACAAAACCAAATTTTTCTTCCTTTGGGAAGATATTGAAGAGATACAAGTGCTTCCTCCATCATTAGCAACTTTAGGAAGCCCTACATTGGTCATAATTCTTCGAAGCGGTCGAGGTCTTGATGCAAGACACGGTGCAAAGACTCAAGATGAAGAAGGGAGACTTAGGTTTCATTTTCAATCATTTTCTTCATTTAGTGCTGCCTCCAGAACAATAAAGGCCTTGTGGAGAACAAGAATTCTAAACCCCTATCAGAGAGAACAAATTCCCGAAGAACATGAAGATCAAGAAGGCTTTGTAATTCCAGAAGACTCTGCATCTATATTAGAGAATGAAGAAAAAATGTCCAGAATTTTCTCTGCAGAACTACCAATCAAGATGATATCTGTGATGGGAATTTTTGGTGGAGGAAACCTGGAGCATAAAATTATGCAGAGAACAGGATGTATGAACTATGAAACTACCTCGTGGGAGCTAGTAAAACCTGATGTCTTCGAGAGGCGTGTTTCATACCAATTCAATCGACAAGTGTCAGCTTTTGGAGGTGAAGTCACATGCACACAACAAAAATGTCCAAATGCAAACACTGGAGGTTGGACTGTGATTGAAATTATGGCTCTTCATGGTGTCCCATTTTCTGACCACTTTCATATTCATCTTAGGTACGAAATTGAGAAATCATCTCTTGGTGAATGTGCTTGCAAGTGTGATGCTTACATTGGTGTTATGTGGCTTAAGAGCTCCAAGTTTCAGCAGAGGATCAACCGGAACATAATAGCCAAGTTTAACCTTCGGTTGAAGGAAATATTTGAACTGGTTCAGAAAGAGATTTTGCTTATGTCTCAGAAATCAAATGGATAA 3039 0.4054 MLRLYVCILEAKDLPVKDTYVKLRIGKFKAKTRILTNKCTPIWNQEFCFRVHDAENVLVVSVVSHVNECRVTNGYVGFVGEVRIPVASISFEDNQTLLPTWFSLQSPKTGKFFNKYCGKVLLTVSLQGKCCASFTKHKHPPNSTFAVENSKDLECLHTSCRAPCDKMGIGKQLKVIANVVHKIFKKKEGNSKPGDSSELSTMLSDFEDSVQEDSSPCSFEEAVALMELGDSKPEMPENLSGGVLVDQIYLVSPSDLNVFLFAPNSRFCKDLAELQGTTNVQEGPWTWKNGDMSSLTRVVSYTKAATKLIKAVTATEEQKYIRVCRKEFAIFVSVSTPEVPYGNTFRIELLYKIMPGGEVSSGEESSHLVVSWSIVFLQSTMMKGMIESGARQGLKESFSLFSEKLAQNFKVQDKANFPDKEHFLATLQTEDQWYWWQAITYFCNFTVVSTIFMCLYVMVHILYCGPSLPQGLEFRGLELPDSFGELIISGVLITQLQRVYNMLSHFVQARFQMGTDHGLKAHGVGWVLTVALIEGVDLASLESEGLSDPYVVFTCNGQTRSSSVKLQTSNPQWNEILEFDATEEPPSVLDVEVFDFDGPFDQDVSLGHAEINFLKHTSTELADMWLLLEGKLAQSSQSKLHLRIFLDNNKGVETIKEYLEKMEKEVGKKLNLRSPQRNSTFQKLFALPPEEFLIKDFTCYLKRKMPLQGRLFLSARILGFHANFFGHKTKFFFLWEDIEEIQVLPPSLATLGSPTLVIILRSGRGLDARHGAKTQDEEGRLRFHFQSFSSFSAASRTIKALWRTRILNPYQREQIPEEHEDQEGFVIPEDSASILENEEKMSRIFSAELPIKMISVMGIFGGGNLEHKIMQRTGCMNYETTSWELVKPDVFERRVSYQFNRQVSAFGGEVTCTQQKCPNANTGGWTVIEIMALHGVPFSDHFHIHLRYEIEKSSLGECACKCDAYIGVMWLKSSKFQQRINRNIIAKFNLRLKEIFELVQKEILLMSQKSNG 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02074 1012 Pfam GRAM domain 681 760 IPR004182 -
Phco7g02074 1012 CDD C2 528 628 - -
Phco7g02074 1012 SMART gram2001c 679 745 IPR004182 -
Phco7g02074 1012 ProSiteProfiles VASt domain profile. 840 1003 IPR031968 -
Phco7g02074 1012 Pfam VAD1 Analog of StAR-related lipid transfer domain 844 985 IPR031968 -
Phco7g02074 1012 Pfam VAD1 Analog of StAR-related lipid transfer domain 244 393 IPR031968 -
Phco7g02074 1012 Pfam C2 domain 527 626 IPR000008 -
Phco7g02074 1012 Pfam C2 domain 3 104 IPR000008 -
Phco7g02074 1012 Gene3D - 677 804 IPR011993 -
Phco7g02074 1012 Gene3D C2 domain 1 128 IPR035892 -
Phco7g02074 1012 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 526 650 IPR035892 -
Phco7g02074 1012 SMART C2_3c 3 98 IPR000008 -
Phco7g02074 1012 SMART C2_3c 527 626 IPR000008 -
Phco7g02074 1012 CDD C2 4 104 - -
Phco7g02074 1012 ProSiteProfiles C2 domain profile. 507 626 IPR000008 -
Phco7g02074 1012 PANTHER BNAA05G37250D PROTEIN 3 1004 IPR044511 -
Phco7g02074 1012 ProSiteProfiles C2 domain profile. 1 102 IPR000008 -
Phco7g02074 1012 ProSiteProfiles VASt domain profile. 240 413 IPR031968 -
Phco7g02074 1012 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 128 IPR035892 -
Phco7g02074 1012 Gene3D C2 domain 512 646 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02074 Phco-Chr7 36204275 36208423 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02074 7 36204275 36208423 Phco7g02074 7 36204275 36208423 ECH