Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02067 ATGAGTGCTCCCATGGACACAGAGCTCACAACCTACGAAAATGGCGCTGTTCCCCAACACTCACTTCCCGAGGACAAAGTTCTTGTCCCTGTCGAGGTAACCCTAAAACCTTCCAGCACCGCTAAAATCGAAGATGTTCGTTCCGCCGTTGAAGGCAGGATGCTTGAAAAGAGGAGTTTGAGCTATATCGATGGACCCATTCCGGTGCCTCTTGATGAGGCGTTTCTCGTAGATAACGTGGAAAGACTTTGCGTTTGCGGATGTGATACTGATGATGGGAGGCACAATGATAATGTTCTTTTGTTCTGGCAAGTCAAGCCTATTGTACATGTTTTTCAGCTTAGCGAGGAAGGTCCATGTGAGGATATAAGCTCTGATGGGCAGTCTTCTAGCTTCAATGAATGGATTCTTCCTGCAAAAGAATTTGATGGCATGTGGGAAAGCTTAATATATGAATCTGGTCTAAAGCAACGGTTATTACGTTATGCAGCAAGTGCTTTGCTCTTTACTGAAAAAGGGGTTGATCCATTCCTTGTTTCGTGGAATCGCATAATTCTGTTACATGGACCTCCTGGGACTGGAAAGACATCTTTATGTAAAGCATTAGCTCAGAAATTAGCAATTCGGTTCAATTCAAGATACCCTCAGTCCCAGCTTATTGAAGTGAATGCACATTCTTTGTTCAGTAAATGGTTCTCTGAAAGCGGCAAGCTGGTAGCGAAACTTTTCCAAAAGATTCAAGAAATGGTAGAGGAAGAAAGCAATCTTGTGTTTGTATTGATTGATGAAGTCGAAAGTCTTGCTGCTGCTAGAAAAGCTGCGCTATCTGGTTCTGAACCTTCTGATTCTATTCGGGTTGTCAATGCATTACTAACTCAGATGGACAAGTTAAAATCATCTCCTAATGTGATAATTCTAACCACTTCCAACATAACTGCAGCTATTGACATTGCTTTTGTCGATCGAGCTGATATCAAAGCATATGTTGGTCCCCCAACTCTTCAAGCTCGGTATGAAATATTAAGGTCCTGCTTGCAGGAACTGATACGTACAGGGATCTTGACTAGTTTACAGGATTGCAAGAATGTCATGCTTCCAAATTACGCTTGTGCAAAGGAGAGGTTGAACGCTCTAGATTTTCATGAGGGTGCTACATTCATGCAACTGTGCAAGCACTTATTGGAAACCGCGGAGGCATGTGAGGGAATGAGTGGAAGGTCTTTGAGAAAGCTTCCATTTTTAGCACATGCTGCACTTTCAAATCCTTATGATTGCAACCCTGTTAAGTTCTTATGTACAATGGTAGAAACAGCAAAGAGGGAGCGTTCTGAGCTTCCTGACCAAAATAACTAA 1353 0.4265 MSAPMDTELTTYENGAVPQHSLPEDKVLVPVEVTLKPSSTAKIEDVRSAVEGRMLEKRSLSYIDGPIPVPLDEAFLVDNVERLCVCGCDTDDGRHNDNVLLFWQVKPIVHVFQLSEEGPCEDISSDGQSSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLAIRFNSRYPQSQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTGILTSLQDCKNVMLPNYACAKERLNALDFHEGATFMQLCKHLLETAEACEGMSGRSLRKLPFLAHAALSNPYDCNPVKFLCTMVETAKRERSELPDQNN 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02067 450 ProSitePatterns AAA-protein family signature. 303 322 IPR003960 GO:0005524|GO:0016887
Phco7g02067 450 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 299 313 IPR001270 GO:0005524
Phco7g02067 450 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 185 203 IPR001270 GO:0005524
Phco7g02067 450 Gene3D - 124 348 IPR027417 -
Phco7g02067 450 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 20 446 IPR044539 -
Phco7g02067 450 Pfam ATPase family associated with various cellular activities (AAA) 185 330 IPR003959 GO:0005524|GO:0016887
Phco7g02067 450 SMART AAA_5 181 333 IPR003593 GO:0016887
Phco7g02067 450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 414 IPR027417 -
Phco7g02067 450 CDD RecA-like_Pch2-like 131 329 - -
Phco7g02067 450 FunFam pachytene checkpoint protein 2 homolog 125 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02067 Phco-Chr7 36079713 36090014 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02067 7 36079713 36090014 Phco7g02067 7 36079713 36090014 ECH