Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02033 ATGATTGCACCATTTCAAGTGCATGAGTGCCAAGTGTGTCGGCTCCAAGCAAAACGTAGTGCTACAAAAGGACTCCCTTCGAGTCTAATAACCATCACCTTCAACATGTTCTTCCTATCTTGCAGTAAAATAATGATCACTACCCTTTTTTTCTTGGTTGGTTTTGGATTCAGCAATGGTGCCAATGTGACACCCTCAGAGGGGAGGAGAGGGCAGTGGCAACTGCTCCTTAAGAGCACTGGCGTGGTTGGCATGCATGTGGCTTTAACCTACAGAAACACAGTCATAATGTTTGATCAAACTGGAGCTGGTCCATCCAGTTACGAGCTTCGCAGACGCTTCACTGGAAGCAGGTGCACCAGAAGCAGCCATGATATGATGGACTCCACATGCTATGCTCATTCTGTGGAGTATGACATTAGTACCAATAAAGTGAGGCCTCTAAGGCTTGACACTGATCCTTGGTGTTCCTCTGGTTCATTCCTAAGCAATGGTACTCTTTTACAAACAGGTGGAAATGACAAAGGTGCCAAAAGGATCAGATTCTTTAGGCCCTGTGGGAATGACAAATGTGACTGGATGCAATCAAAGAAAATACTATCTGATAAGAGGTGGTATGCTTCTAGTCTGCTACTACCAGAACATGATAGGGTGGTTGTTGTTGGTGGAAGAAGAGCTTTAACATATGAATTTGTACCAAAAATTAGTCCTGGAGAAAAATCCTTTGACCTTCCATTCTTGCACCAAACCGATGACAGGAACGAAGGAGGGAACAACCTATACCCCTTCCTCCACCTTTCATCAGATGGAAACTTGTTTATTTTCGCCAACCGCGATTCCATCCTACTCAACTTGCGAAGAAACAAAGTGATCAAGACCTTCCCCAGGATTCCGGGAGAAGGGTCAAGAAACTATCCAAGCTCAGGCTCATCTGTGATACTACCATTGGACCATAGAGACAACTTCCAAAGGGTGGAAGTTATGGTGTGTGGAGGTTCATCTACTGGAGCCTTTACAGCTGCTGCTAAGCGAAGATTCTTGATAGGGTTAAGATCATGTGGAAGAATGGTGATCACAGGAAACAAGCACAAGTGGGATATGGAGCACATGCCCAAGCCACGTCTCTTACACAACATGCTGATTCTCCCTAAAGGTGACATCCTAATTATAAATGGGGCGAAACGAGGGTCTGCAGGATATGACAATGCAAGAAACGCTTCTCTTGAACCTTATCTCTACAGCCCCAAGAAAAGACTTGGAGCAAGGTTCACAGTCCTTATGTCTACCAAGATAGCCAGAATGTATCACTCATCAGCAGCTCTTCTTCCTGATGGGAGGGTCTTGGTTGCGGGTAGTAACCCTCATGGGAGGTACACCTTTCACAATGTGGCATACCCAACTGAACTAAGACTTCAAGCATTTGTTCCACACTACATGGAAAGGAGGTATCATAACTGGAGGCCTAGTAACTTGACCATAGAATATTCTGGTGCCACCAGCCATGCAATTGGGTATGGGAAAGAGTTTACTGTTAGGTTCTTCCTAGAGAGGAGGCCTAGCAATGTGATGGGGTTCAGTGCCTATGCACCACCATTTACCACTCATTCCTTTTCCATGAATCAGAGGATGCTGAAGCTGAGGTGCAGGAGCATGGTGAGAAGTGGTGATGGGTGGGTGGTTGCAGTCTTGGAAGCCCCACCATCATCCCTTGTTGCACCTTCTGGTTACTACATGCTCACGGTTGTCAATGGTGGAATTCCAAGCATGTCTCAGTGGGTTCAGTTTGGACACGCCTAG 1797 0.4597 MIAPFQVHECQVCRLQAKRSATKGLPSSLITITFNMFFLSCSKIMITTLFFLVGFGFSNGANVTPSEGRRGQWQLLLKSTGVVGMHVALTYRNTVIMFDQTGAGPSSYELRRRFTGSRCTRSSHDMMDSTCYAHSVEYDISTNKVRPLRLDTDPWCSSGSFLSNGTLLQTGGNDKGAKRIRFFRPCGNDKCDWMQSKKILSDKRWYASSLLLPEHDRVVVVGGRRALTYEFVPKISPGEKSFDLPFLHQTDDRNEGGNNLYPFLHLSSDGNLFIFANRDSILLNLRRNKVIKTFPRIPGEGSRNYPSSGSSVILPLDHRDNFQRVEVMVCGGSSTGAFTAAAKRRFLIGLRSCGRMVITGNKHKWDMEHMPKPRLLHNMLILPKGDILIINGAKRGSAGYDNARNASLEPYLYSPKKRLGARFTVLMSTKIARMYHSSAALLPDGRVLVAGSNPHGRYTFHNVAYPTELRLQAFVPHYMERRYHNWRPSNLTIEYSGATSHAIGYGKEFTVRFFLERRPSNVMGFSAYAPPFTTHSFSMNQRMLKLRCRSMVRSGDGWVVAVLEAPPSSLVAPSGYYMLTVVNGGIPSMSQWVQFGHA 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02033 598 PANTHER SECRETED PROTEIN-RELATED 61 595 - -
Phco7g02033 598 CDD E_set_GO_C 503 594 IPR015202 -
Phco7g02033 598 Gene3D Immunoglobulins 492 597 IPR013783 -
Phco7g02033 598 SUPERFAMILY Galactose oxidase, central domain 133 479 IPR011043 -
Phco7g02033 598 Gene3D - 67 484 IPR037293 -
Phco7g02033 598 Pfam Galactose oxidase-like, Early set domain 498 594 IPR015202 -
Phco7g02033 598 Pfam Glyoxal oxidase N-terminus 85 332 IPR009880 -
Phco7g02033 598 SUPERFAMILY E set domains 484 595 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02033 Phco-Chr7 35055311 35057107 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02033 7 35055311 35057107 Phco7g02033 7 35055311 35057107 ECH