Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02031 ATGACTGTCACGGCGGCGCCAACGGTGAAGGACGGATGTCTTATGGTGAGGGGCAAGACCGTTTTGTCCCATGTCCCCGGAAACGTAGTTGTTTCTCCGGTTGGAACAGAGTCCGCGTTCTTGGGTGCCACTTCAACCGTTTCAAGTTCTCGTCATGTTTTCGATCTTGGAATTCTTCAGGGATATAAGTTGGTATCTTTGTTCAGAGTCAAAATCTGGTGGATGATACCACGTCTAGGGAGATCTGCCAGTGATGTTCCAATGGAAACTCAATTGCTGCTCCTGGAAGCAAAAGAAGAATCAGCACCTGAGGATGAGCTTTCTTCTGATTCTGAAGAGACAGCTACAGATAACACTTCCTACATTCTCTTCTTGCCTGTTTTGGATGGACAGTTTCGCTCAACCTTACAAGGAACTCAATCAAATCAGCTCCAGTTTTGCATTGAAAGCGGAGATGCCCATGTTCAAACTTCCCAATCATTGGAAGCGGTATTTATAAATTCAGGGGACAATCCATTTGAGTTAATCAGGGATTCAATCAAGATACTGGAGAAACACAAAGGGACTTTCAGTCATCTTGAAAACAAGAGGATCCCAGCACATCTTGACTGGTTTGGATGGTGCACTTGGGATGCTTTTTACACTGAAGTGTGTCCACAAGGAATTAAAGAGGGCCTTCAAAGTTTCTCAAATGGAGGTTGTTCGCCAAAGTTTATCATCATTGATGATGGATGGCAAGAGATCCTCAATACGTTTCACAAAGAAGGTGAACCAGTGATCGAGGGAACCCAGTTTGCAACCAGACTAGCAGACATCAAAGAAAACAAAAAGTTCATCAATGCAGGCTCTGACAATTCTTGCAGCAATCTCCACGATTTTGTTGACTCTATCAAACATAATATGAACGTAAAATACGTTTACATATGGCATGCTTTAGCTGGTTATTGGGGAGGTGTACTCCCATCATCAGATACATTGAAGAAATATAATCCAAAGCTCGCATATCCAATTCAGTCACCTGGTGCCACAGGGAACCTTAGAGATATAGCCATGGACAGCCTTGAAAAATATGGAGTGGGAATCATTGACCCAGAAAATATATATGACTTTTACAATGACTACCACAGTTACCTTGCCAGCTGTGGTGTGGATGGAATCAAAGTAGATGTCCAGAATTTGATAGAAACGTTGGGTTCTGGGTACGGTGGTCGTGTATCATTGACCAAACGGTATCAAGAAGCATTAGAGCAATCTGTAATAAGGCACTTTAAGCACAACAACCTCATTTGCTGCATGTCTCACAACTCGGATTCAATTTACAGTTCAAAGAAGAGTGCAGCAGCAAGAGCATCTGAGGATTTCATGCCAAGAGAACCAACATTTCAAACCTTACACGTTGCCTCTGTCGCGTTTAACAGCCTTCTTCTGGGAGAGATATTTGTGCCAGACTGGGACATGTTCCATAGCAAGCACGAGACAGCGGAGTTCCATGCTGCAGCAAGAGCAATTGGTGGTTGTGCAGTATATGTAAGTGACAAGCCCGGCAATCAAGATTTTAAAATCCTCAAGAAGCTAGTGCTACCTAATGGATCAGTCCTGAGAGCAAGATTTGCTGGTCGTCCTACTAGAGATTGTTTGTTTGAAGACCCCGTGATGGATGGTAAAACTTTGCTGAAAATTTGGAATTTGAATGCACTGACCGGGGTGGTAGGCATCTTCAATTGCCAAGGAGCAGGAAGCTGGCCACTGAAATCGTTGGAAGCCGCACCTTTGCGCATAACCATTTCAGGGAAAGTGAGACCCCTTGATGTTGAATTTCTTGAAGAAGTTGCAGGAGAAAATTGGAGTGGAAGTTGCATAGTATATGCTTTCAATGCAGGCTTGCTTTCCATGGTTTCTCACAGAGGAAAACTTGAAACGTCCCTGGAGACACTCCAATGTGAAATATATACAGTATCTCCAGTAAGGGTGTTTGGTCATGATGTGCACTTTGCACCAATAGGATTGCTTGACATGTACAATTCGGGAGGAGCAGTAGAAGCCTTGGACTGCAACATGGATGTTGCACAGTGCATAGTAAAAGTCAAAGGCAGAGGTTGTGGCCGTTTTGGAGCTTACTCCAACGTTAGACCAAAGCGTTGTAAAGTAGACATGAAGGAGGAGGAGTTCTCCTACAACCCTGAAGATGGACTATTGACGTTTAAGCTTGATGGTGAAGGCAATTCAAGGGATATAGAATTTGTATACTGA 2250 0.4364 MTVTAAPTVKDGCLMVRGKTVLSHVPGNVVVSPVGTESAFLGATSTVSSSRHVFDLGILQGYKLVSLFRVKIWWMIPRLGRSASDVPMETQLLLLEAKEESAPEDELSSDSEETATDNTSYILFLPVLDGQFRSTLQGTQSNQLQFCIESGDAHVQTSQSLEAVFINSGDNPFELIRDSIKILEKHKGTFSHLENKRIPAHLDWFGWCTWDAFYTEVCPQGIKEGLQSFSNGGCSPKFIIIDDGWQEILNTFHKEGEPVIEGTQFATRLADIKENKKFINAGSDNSCSNLHDFVDSIKHNMNVKYVYIWHALAGYWGGVLPSSDTLKKYNPKLAYPIQSPGATGNLRDIAMDSLEKYGVGIIDPENIYDFYNDYHSYLASCGVDGIKVDVQNLIETLGSGYGGRVSLTKRYQEALEQSVIRHFKHNNLICCMSHNSDSIYSSKKSAAARASEDFMPREPTFQTLHVASVAFNSLLLGEIFVPDWDMFHSKHETAEFHAAARAIGGCAVYVSDKPGNQDFKILKKLVLPNGSVLRARFAGRPTRDCLFEDPVMDGKTLLKIWNLNALTGVVGIFNCQGAGSWPLKSLEAAPLRITISGKVRPLDVEFLEEVAGENWSGSCIVYAFNAGLLSMVSHRGKLETSLETLQCEIYTVSPVRVFGHDVHFAPIGLLDMYNSGGAVEALDCNMDVAQCIVKVKGRGCGRFGAYSNVRPKRCKVDMKEEEFSYNPEDGLLTFKLDGEGNSRDIEFVY 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02031 749 Pfam Raffinose synthase or seed imbibition protein Sip1 9 735 IPR008811 -
Phco7g02031 749 Gene3D Aldolase class I 200 527 IPR013785 -
Phco7g02031 749 SUPERFAMILY (Trans)glycosidases 200 533 IPR017853 -
Phco7g02031 749 PANTHER - 1 738 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02031 Phco-Chr7 35015981 35019732 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02031 7 35015981 35019732 Phco7g02031 7 35015981 35019732 ECH