Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02030 ATGACCCAGGAATCCACACTGCTATCCGCGCAACAGACTAAGAGTTTTGGGGTTGTGTATGATATTTTAGACATCAGAAGGCTTCCCTGGTTTTCTTATCCTCATACACTCTTCTTCTCCTTCACCTTCATACTTTCTTACATGTCTATCACTGCCACTGCCTTCAAGTCCCTCACCATGGCCGATTCGTGCCTCCTCTCTTCTCCCTCCTCTCTCTTCCACAACATAACCAAATCCCACGTCTTCTCGCCTCCCTCCAAACCCCTCACACTCCAATTCTCATGCCTCAACTCCTCACCCTCGCTCTCTCTTTCCCTCGCTGCACGAACCCACCGTTCCCCCGTCCTCACCTACGTCGCCCAAACTTCCGATTGGGCCCAGCAAGAAGGCAACGCCGACACCGTCCAGGCCCAAGACGAAAAACAAGAAGAGGCTGGCCTCCTCGATTGGGAGCCCAACGGCGAAGATGAGGGTTTCGTGGAACCGCCGGAAGAGGCCAAACTCTTCGTCGGCAACTTGCCTTACGACGTTGATAGTGAGAAATTGGCCATGTTATTCGAACAAGCCGGAATCGTTGAAATCGCCGAGGTGATTTATAACAGGGAAACTGACCGGAGTCGCGGATTTGGGTTTGTGACGATGAGTACTGTTGAACAAGCTGAGAAAGCTGTGGAGAAATTCAGTGGCTATGATTATGATGGAAGACAGTTGACTGTTAATAAGGCTTCTCCGAGAGGAGCTCAACCTGAACGCCCACCTCGTCGTAACTTTGAGCCTGCCTATTCTATCTATGTTGGTAATTTGCCATGGGATATTGATAGCACAAGGTTGGAGAAAGTTTTCAGTGAGCATGGTAAGGTTTTGAGTGCTAGGGTAGTCTATGACAGGGACAGTGGTCGTTCTCGTGGCTTTGGCTTTGTCACAATGTTCAATGAATTAGAAATGAATGATGCTGTTGCTGCTCTTGATGGTCAGACTTTGGACGGAAGAACAATTAGGGTGAATGTTGCTGAGGACAGACCCCCCAGGCGTAGCTCCTTCTGA 1044 0.4962 MTQESTLLSAQQTKSFGVVYDILDIRRLPWFSYPHTLFFSFTFILSYMSITATAFKSLTMADSCLLSSPSSLFHNITKSHVFSPPSKPLTLQFSCLNSSPSLSLSLAARTHRSPVLTYVAQTSDWAQQEGNADTVQAQDEKQEEAGLLDWEPNGEDEGFVEPPEEAKLFVGNLPYDVDSEKLAMLFEQAGIVEIAEVIYNRETDRSRGFGFVTMSTVEQAEKAVEKFSGYDYDGRQLTVNKASPRGAQPERPPRRNFEPAYSIYVGNLPWDIDSTRLEKVFSEHGKVLSARVVYDRDSGRSRGFGFVTMFNELEMNDAVAALDGQTLDGRTIRVNVAEDRPPRRSSF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02030 347 PANTHER OS02G0815200 PROTEIN 72 344 - -
Phco7g02030 347 CDD RRM2_NsCP33_like 263 337 - -
Phco7g02030 347 Gene3D - 117 251 IPR012677 -
Phco7g02030 347 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 166 244 IPR000504 GO:0003723
Phco7g02030 347 SUPERFAMILY RNA-binding domain, RBD 162 255 IPR035979 GO:0003676
Phco7g02030 347 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 261 339 IPR000504 GO:0003723
Phco7g02030 347 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 263 333 IPR000504 GO:0003723
Phco7g02030 347 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 168 237 IPR000504 GO:0003723
Phco7g02030 347 Gene3D - 252 346 IPR012677 -
Phco7g02030 347 SMART rrm1_1 167 240 IPR000504 GO:0003723
Phco7g02030 347 SMART rrm1_1 262 335 IPR000504 GO:0003723
Phco7g02030 347 FunFam 31 kDa ribonucleoprotein, chloroplastic 250 346 - -
Phco7g02030 347 SUPERFAMILY RNA-binding domain, RBD 250 345 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02030 Phco-Chr7 35000318 35004396 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02030 7 35000318 35004396 Phco7g02030 7 35000318 35004396 ECH