Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02014 ATGGAGGAGAAGTTTGGAGTAGCAGAAGAGAGCTCTAACTCCAGGGTTCTTCACCAGACGACCGCCAAGCTCGTCATTTTGGCCGACCTCAACGTTGATCCTCCCGAAGCCGACGACGACGACTCCTCCCTTCTCCCTCCTCCATCGATTGCAACTTTGGCAAATGATGAAAGCAGTCAAGATAAGAGTTTGTTGTCCAAAGAAACTGACAGCATTGAAAGTGAAAGCAAAAAGTTGAACAAACTGGGGAAATGTCGTTCCAGACTTAGCAAGACAGATTCTTCTCTTGATTGTGGAGCTGATGCTGATGGCGATCAACATGTTCAAGGACCTCCTTCATCTCGAGAGGAAAAAGTTAGCAGTGTGAAGACTGGCTTGGTTCATGTTGCAAAGAAGATGCCCAAAAATGCTCATGCTCATTTTATACTTGGCTTGATGTACCAAAGATTAAGCCAGCCTCAAAAGGCTGTGTTGGCTTATGAGAAGGCAGAAGAGATCTTGCTCAGACCAGAGGCTGAGATTGATAGGCCAGAGTTGCTTTCGTTAGTTCAGATTCATCATGCACAGTGCCTGTTACTAGAAAGTTCATTGGAAAATAATTCTGATAAAGAACTTGAACCTCGTGAACTTGAAGAGATTCTTTCTAAGCTGAAAGAGTCAATGCAATCAGATGTTAGACAGACAGCTGTATGGAACACACTGGGTTTTATCCTTCTTAAAACTGGTCGCGTGCAGAGTGCTATCTCAGTTTTGTCATCATTGTTGTCCATTGCACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTTATCTTAAAATTGGGAATTTGGAATTATCTGCAAAATGTTTCCAACAATTGATTCTAAAAGATCAAAATCATCCTGCAGCTTTGGTCAATTATGCTGCCCTTCTTTTGAGTAAATATGCTTCAGTTGTGGCAGGTCCTGGTGCAAGTGCCTCTGAAGATGCAATGGCTGATCAGATCATGGCTGCAAATGTTGCCAAGGAATGTTTGTTGGCTGCAGTTAAAGCAGATAGCAAATCAGCCCATCTATGGGCAAATCTTGCCTATGCATTTTCTGTTAGTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCTGCCAAACTGGAACCCAATTGCATGTCTACTCGATATGCTGTTGCTATCCATCGAATAAAGGAGGCAGAAAGGTCGCAAGATTGTAGTGAACTGCTTTCATGTGCTGGAAATGAAATGGCTTCTATAATAAGAGATGGTGATTCATCCCTGGTTGAGACTCCAATAGCATGGGCTGGGCTTGCCATGGTTCACAAGGCTCAACATGAGATAGTGGCAGCATATGAAAGTGAACAGCTCGGGTTGAGAGAAGTTGAAGAGCGTGCTGTTTGCAGTTTAAAGCAGGCTATAGCCGAAGATCCGAATGATGCGGTGCAGTGGCATCAGCTCGGCGTTCATAGTCTCTGTGCTCGGCAATTCAAAACATCACAAAAGTACCTCAAAACTGCTGTTGCCTCTGACAAGGATTGCAGCTATGCATGGTCTAACCTAGGTGTCTCACTTCAACTATCAGAGGAACCAGCACAAGCTGAAGAAGTGTACAAGAAAGCATTGTCTTTGGCAACAACTCAACAAGCGCATGCTATATTATCCAACTTGGGAATTCTCTATCGCCATCAGAAACAATATCAACGTGCGAAGGCTATGTGTACAAAGTCACTTGAACTACAGCCTGGGTATGCTCCTGCATTCAACAATCTGGGTCTTGTGTTTGTTGCTGAGGGTCTTTTGGAAGAAGCCAAGTATTGTTTCAACAAAGCTCTCCAATCAGATCCATTACTGGATGCAGCTAAGTCTAATATGATGAAGGCAGTTGTCATGTCAAAGTTATGCAAAGGTCTCTCCTCATGCGCTCTTAAAGAATGA 1935 0.4377 MEEKFGVAEESSNSRVLHQTTAKLVILADLNVDPPEADDDDSSLLPPPSIATLANDESSQDKSLLSKETDSIESESKKLNKLGKCRSRLSKTDSSLDCGADADGDQHVQGPPSSREEKVSSVKTGLVHVAKKMPKNAHAHFILGLMYQRLSQPQKAVLAYEKAEEILLRPEAEIDRPELLSLVQIHHAQCLLLESSLENNSDKELEPRELEEILSKLKESMQSDVRQTAVWNTLGFILLKTGRVQSAISVLSSLLSIAPENYDCLGNLGIAYLKIGNLELSAKCFQQLILKDQNHPAALVNYAALLLSKYASVVAGPGASASEDAMADQIMAANVAKECLLAAVKADSKSAHLWANLAYAFSVSGDHRSSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDCSELLSCAGNEMASIIRDGDSSLVETPIAWAGLAMVHKAQHEIVAAYESEQLGLREVEERAVCSLKQAIAEDPNDAVQWHQLGVHSLCARQFKTSQKYLKTAVASDKDCSYAWSNLGVSLQLSEEPAQAEEVYKKALSLATTQQAHAILSNLGILYRHQKQYQRAKAMCTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFNKALQSDPLLDAAKSNMMKAVVMSKLCKGLSSCALKE 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02014 644 ProSiteProfiles TPR repeat profile. 550 583 IPR019734 GO:0005515
Phco7g02014 644 Gene3D Tetratricopeptide repeat domain 463 549 IPR011990 GO:0005515
Phco7g02014 644 Pfam Tetratricopeptide repeat 550 612 - -
Phco7g02014 644 MobiDBLite consensus disorder prediction 32 79 - -
Phco7g02014 644 MobiDBLite consensus disorder prediction 61 79 - -
Phco7g02014 644 Pfam Tetratricopeptide repeat 238 297 - -
Phco7g02014 644 SUPERFAMILY TPR-like 132 387 IPR011990 GO:0005515
Phco7g02014 644 ProSiteProfiles TPR repeat profile. 228 261 IPR019734 GO:0005515
Phco7g02014 644 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 19 640 - -
Phco7g02014 644 ProSiteProfiles TPR repeat profile. 584 617 IPR019734 GO:0005515
Phco7g02014 644 ProSiteProfiles TPR repeat profile. 351 384 IPR019734 GO:0005515
Phco7g02014 644 SMART tpr_5 351 384 IPR019734 GO:0005515
Phco7g02014 644 SMART tpr_5 584 617 IPR019734 GO:0005515
Phco7g02014 644 SMART tpr_5 514 547 IPR019734 GO:0005515
Phco7g02014 644 SMART tpr_5 550 583 IPR019734 GO:0005515
Phco7g02014 644 SMART tpr_5 480 513 IPR019734 GO:0005515
Phco7g02014 644 SMART tpr_5 137 170 IPR019734 GO:0005515
Phco7g02014 644 SMART tpr_5 262 295 IPR019734 GO:0005515
Phco7g02014 644 SMART tpr_5 228 261 IPR019734 GO:0005515
Phco7g02014 644 Pfam Tetratricopeptide repeat 351 384 IPR019734 GO:0005515
Phco7g02014 644 Gene3D Tetratricopeptide repeat domain 62 325 IPR011990 GO:0005515
Phco7g02014 644 SUPERFAMILY TPR-like 463 615 IPR011990 GO:0005515
Phco7g02014 644 Gene3D Tetratricopeptide repeat domain 550 628 IPR011990 GO:0005515
Phco7g02014 644 Gene3D Tetratricopeptide repeat domain 332 416 IPR011990 GO:0005515
Phco7g02014 644 MobiDBLite consensus disorder prediction 93 120 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02014 7 34520269 34527132 Phco7g02014 7 34520269 34527132 ECH