Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02004 ATGCTCAAATCATCCTTCACTCCCCTTTTCTGGGTGCTTAACCCTAAACCCAAACCTCAAAAACTTCCCTCCCACCTATTCACCAAAACCTTCTTCACTAACAGCACGCCACCCGTTCGACACAATGCCTCTCTCAACCTTCCCACCCTACCACCCGCTTCCTCCGCCTACGTCCACCTCCCTTTCTGCCGGAAACGCTGCCACTATTGCGACTTCCCCGTCGTAGCTCTCGGCTCCGCCTCCACCCAAACCCACCACGACCCTCGCGTCTCCAACTACATCCACTGGCTCTGCCGGGAAATCACCGCCACCAAAGTGGATCAACCCGCTTCCACCACGCCCCTCCAGACTGTCTACTTTGGCGGTGGAACACCCTCGCTGGTGCCTCCTGCGATGGTTTCATCCGTTTTGGAGACTCTGAGGGTGAAGTTTGGGATTTGTGAGGACGCGGAAATATCGATGGAGATGGACCCCGGCACGTTTGATGCTGTGAAGATGAGGGAGATGATGGCGTTGGGGGTGAATAGAGTGTCTTTGGGAGTGCAGGCGTTTCAAGAGGAGCTGTTGAGAGCGTGTGGCAGGGCACATGGGGTGCAAGAGGTTCATGAGGCTATTGGTGTTGTGAAGTCGTGTGGGGTTGAGAATTGGAGTGTTGATCTCATAGCTTCGTTGCCTCATCAGAGTTGTGAGATGTGGGAGGAAAGTTTAAGGCTCACCATTCAGTCGCAACCTTCTCACGTGTCTGTTTATGACCTGCAAATTGAGCAAGGAACAAAATTTGGACGATTGTACTCACCAGGGGAATTTCCGATGCCTTCTGAAGCACAATCGGCTGAGTTCTATAAGATGGCTTCAAGAATGCTTTCTGATGCGAATTACAACCATTATGAAATCAGCAGCTACTGCAAGAGTGGGTACGAGTGCAAACACAACTCTATCTACTGGAAGAACGAGCCGTTCTATGCCTTTGGCCTTGGCTCTGCCAGTTTTGTTGGTGGGTTGAGGTTTTCAAGACCAAGGAAGGTCAATGATTACATCAATTTTGTGCAGAATCTGGAAAATGGATTAGTAGATAGCTCTGGTGGTGATGGTAACATTCATGGCAAGGACACCGCCATGGATGTGGTGATGCTGTCCCTAAGAACTGCACAAGGCCTAGACTTAAAGAGTTTCCAAGAATCATTTGGTAGCTCTGTTGTTTTGTCTTTGCTAGAGTCTTATAAACCTTATGTTGAGAGTGGGCTTGTGGTTTGCTTGGACGAGCATAGGAGAACCATTATAGTAGATGACCTTAACAATTTTTTTTTGTATAAAGCTAACACAGAAAAGAGGGTGGCTTACATAAGGCTAAGTGATCCAGAAGGTTTCCTCTTATCAAATGAGTTGATAGCCCTTGCTTTTGGGGTTATTGACTCTTGGAAGGATTGCCCTCCATACCAAGAAGCAAAAGCCACTTGA 1458 0.4856 MLKSSFTPLFWVLNPKPKPQKLPSHLFTKTFFTNSTPPVRHNASLNLPTLPPASSAYVHLPFCRKRCHYCDFPVVALGSASTQTHHDPRVSNYIHWLCREITATKVDQPASTTPLQTVYFGGGTPSLVPPAMVSSVLETLRVKFGICEDAEISMEMDPGTFDAVKMREMMALGVNRVSLGVQAFQEELLRACGRAHGVQEVHEAIGVVKSCGVENWSVDLIASLPHQSCEMWEESLRLTIQSQPSHVSVYDLQIEQGTKFGRLYSPGEFPMPSEAQSAEFYKMASRMLSDANYNHYEISSYCKSGYECKHNSIYWKNEPFYAFGLGSASFVGGLRFSRPRKVNDYINFVQNLENGLVDSSGGDGNIHGKDTAMDVVMLSLRTAQGLDLKSFQESFGSSVVLSLLESYKPYVESGLVVCLDEHRRTIIVDDLNNFFLYKANTEKRVAYIRLSDPEGFLLSNELIALAFGVIDSWKDCPPYQEAKAT 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02004 485 ProSiteProfiles Radical SAM core domain profile. 48 291 IPR007197 GO:0003824|GO:0051536
Phco7g02004 485 Gene3D tm_1862 like domain 62 289 IPR023404 -
Phco7g02004 485 PANTHER COPROPORPHYRINIGEN III OXIDASE 46 472 IPR034505 -
Phco7g02004 485 NCBIfam radical SAM family heme chaperone HemW 55 416 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Phco7g02004 485 SUPERFAMILY Radical SAM enzymes 46 423 - -
Phco7g02004 485 SMART MiaB 53 283 IPR006638 GO:0003824|GO:0051536
Phco7g02004 485 SFLD HemN-like, clustered with heat shock genes 54 419 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Phco7g02004 485 SFLD anaerobic coproporphyrinogen-III oxidase like 54 419 - -
Phco7g02004 485 Pfam Radical SAM superfamily 58 238 IPR007197 GO:0003824|GO:0051536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02004 7 34253162 34254863 Phco7g02004 7 34253162 34254863 ECH