Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01994 ATGGCACCAACTGTACCTATAGAGTTTGCTGGACAAAAGGAATCCAGAAAGTACTCTCATTCACAGAATATGGGGAAGTCTAGGAAATATTCTAAAGCTTATGCTGCTGGCTTTGTTCCTGATTTTCGGCATGCTGTTGAGACTATGGGTGAATCGGAAGGGTTGGGTAGCTTGGGAAGGGTTGATACGGAGCTGACGGCATCAGCAGATTCTTGTGCACCAAAGAGGAAATGCCCTGGTTTGAATACCGGTGGTTATGGTAGTTTTGATGTACCTTTTCAACTTTTCTCTTTGTCAAGGATGTCGGGTTTTGAGAGAAAGGATTTGAAAACGAGGTTGACATGGGAACTTGAACAGGTTAAGGAATTTCAGAAGAAAGTTGAGGCTATGAACTCAAATGTTGTTGGATTGTCACCCTCCAGTGATATTAGGAGCTGCAGTGCAGGGCAGAAGAGGCCTAAGTTGGAGAGCCAGCATATGACAATGGAAGTATCGGTGCCACATGGTAAGAAGAGGCCCTTACCAGCAAATAGTGGTCCCAAGACAAAGAAAACTATATCTGGGCGTCCTGAATTTCCAAAACCTGCTGCGCCAGTGACCTCACATGCTGCGATGCTGAAACCGTGTGAGTCATTGCTTAACCGATTGATGACACATCAATTTGGTTGGGTTTTTAACACACCAGTTGATGTTGTTAAATTGAACATTCCGGATTATTTCACTGTGATAAAACATCCAATGGATTTGGGTACTGTGAAGAGGAGAATAACCTCTGGTGAATACTTAAATCTCATGGATTTTGCTGCTGATGTGCGACTGACTTTCTCAAATGCAATGACTTATAATCCACCAGGCAATGACGTACACCTCATGGCAGATACCCTTAATAAAATTTTTGAATCGAGATGGAAGGCAATAGAAAAAAAAATTCCTGTTATTGACTGTGTCCCATCTGAACCTTCTAGAACTATTCGTGTGGATACAGAATTTTCTGATCGAGTTCCTCCCACAAAAAAGAAGAAAATAACATCAAATAATGTCAAGCATGAGCCTCTTAAAAAAATCATGACTGTAGAGGAGAAGCATAAATTGAGTGTAGAGTTGGAGGCAATGCTTGGAGAGCTGCCTGATGCTATTGTTGATTTCTTGAGAGAGCAAAGTTATAATGCAGGGCAAACCAATGATGATGAAATTGAAATTGATATCGATGCTCTAAGTGATGATACCCTGTTTAAACTGCGGAAGCTTCTGGATGATTATTTGCTGGAGAAGCAAAGATCCCAGGCAAAAGCTGGACAATGTGAAATGGAGCCTCTGAATGAATCAGGGTTCAGTAATTCTCCGGTGCAGGGCAAAGGCAATGAACAGGTTGAGGAGGATGTGGACATTGTTGGTGGAAATGATCCTCCTATTTCAACTTATCCTCCATTAGAGATTGAAAAAGATGGTAACCATAGAAACAGTAAATGTAGTAGTTCAAGCAGCTCTAGTAGTGAATCTGGCACTTCATCCAGTGATTCAGACTCGGGTAGTTCATCTGGCAGTGAGTTGGATATGGCTAAAACATCAGAACCTCTTAGTGGTACCAAGGAAAATGTAGGATCTGGCTTGACTTTAGATCAGAACAAAGGGGATCCTGGTAATTCAGAAACTGGAAAGGATTCAACAAATGTGGGAGGCCGAGTTGATCACACTTCCCAGAGTAAGCTTGTTGCTTCTGAACCAGAAAGCCATCAAGAGGGGGAGAGTGCTGCATCTAAGAGGCAAGTCTCTCCCGAAAAGCTCTACCGTGCAGCTTTATTAAGGAGCCGTTTTGCTGACACCATTCTTAAAGCTCAAGAGAAAGCCCTTGAAAAGGATGAAAAGCGGGATCCTGAAAAACTTAGGATAGAGCGAGAAGATCTTGAACGGCGGCAGAAAGAAGAGAAAGCACGGTTACAGGCAGAGGCAAAGGCTGCAGAAGAAGCTCGGAGGAAGGCTGAAGCTGAAGCTGCAGCTGAAGCCAAAAGGAAAAGGGAACTGGAAAGAGAAGCAGCCCGTCAAGCTTTGCAAAAGATGGAGAAAACTGTTGATATCAACGAGAGCAGTCAATTTTTGGAAGATCTTGAGATGCTGAGTGCTGTACATGACGAACCTATGCCAAGTTTCAAAGAGGAGACAAGCACAGATCAACCTCAAAATGGATTGGGTAGGATCAAGCTACAGGGGAATCCCTTAGAACAGCTAGGATTGTATATGAAGGATGATGATGAGGAGGAGGAGGAAGAGGAGGAGGAGGATCTGCCTGCATGTGGTGCTGCAGGACCATCAAATGATGTCGAAGAAGGAGAAATTGACTGA 2340 0.4338 MAPTVPIEFAGQKESRKYSHSQNMGKSRKYSKAYAAGFVPDFRHAVETMGESEGLGSLGRVDTELTASADSCAPKRKCPGLNTGGYGSFDVPFQLFSLSRMSGFERKDLKTRLTWELEQVKEFQKKVEAMNSNVVGLSPSSDIRSCSAGQKRPKLESQHMTMEVSVPHGKKRPLPANSGPKTKKTISGRPEFPKPAAPVTSHAAMLKPCESLLNRLMTHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKRRITSGEYLNLMDFAADVRLTFSNAMTYNPPGNDVHLMADTLNKIFESRWKAIEKKIPVIDCVPSEPSRTIRVDTEFSDRVPPTKKKKITSNNVKHEPLKKIMTVEEKHKLSVELEAMLGELPDAIVDFLREQSYNAGQTNDDEIEIDIDALSDDTLFKLRKLLDDYLLEKQRSQAKAGQCEMEPLNESGFSNSPVQGKGNEQVEEDVDIVGGNDPPISTYPPLEIEKDGNHRNSKCSSSSSSSSESGTSSSDSDSGSSSGSELDMAKTSEPLSGTKENVGSGLTLDQNKGDPGNSETGKDSTNVGGRVDHTSQSKLVASEPESHQEGESAASKRQVSPEKLYRAALLRSRFADTILKAQEKALEKDEKRDPEKLRIEREDLERRQKEEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQKMEKTVDINESSQFLEDLEMLSAVHDEPMPSFKEETSTDQPQNGLGRIKLQGNPLEQLGLYMKDDDEEEEEEEEEDLPACGAAGPSNDVEEGEID 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01994 779 SMART bromo_6 198 308 IPR001487 GO:0005515
Phco7g01994 779 Coils Coil 632 689 - -
Phco7g01994 779 MobiDBLite consensus disorder prediction 439 453 - -
Phco7g01994 779 MobiDBLite consensus disorder prediction 615 680 - -
Phco7g01994 779 ProSiteProfiles NET domain profile. 346 428 IPR027353 -
Phco7g01994 779 Pfam Bromodomain 209 292 IPR001487 GO:0005515
Phco7g01994 779 MobiDBLite consensus disorder prediction 488 574 - -
Phco7g01994 779 MobiDBLite consensus disorder prediction 746 762 - -
Phco7g01994 779 MobiDBLite consensus disorder prediction 431 592 - -
Phco7g01994 779 SUPERFAMILY Bromodomain 182 312 IPR036427 GO:0005515
Phco7g01994 779 Gene3D - 349 428 IPR038336 -
Phco7g01994 779 ProSiteProfiles Bromodomain profile. 217 289 IPR001487 GO:0005515
Phco7g01994 779 Gene3D - 194 313 IPR036427 GO:0005515
Phco7g01994 779 MobiDBLite consensus disorder prediction 708 779 - -
Phco7g01994 779 PANTHER TRANSCRIPTION FACTOR GTE8 189 759 - -
Phco7g01994 779 MobiDBLite consensus disorder prediction 165 199 - -
Phco7g01994 779 PRINTS Bromodomain signature 252 270 IPR001487 GO:0005515
Phco7g01994 779 PRINTS Bromodomain signature 270 289 IPR001487 GO:0005515
Phco7g01994 779 PRINTS Bromodomain signature 236 252 IPR001487 GO:0005515
Phco7g01994 779 PRINTS Bromodomain signature 220 233 IPR001487 GO:0005515
Phco7g01994 779 Pfam Bromodomain extra-terminal - transcription regulation 356 418 IPR027353 -
Phco7g01994 779 CDD Bromo_plant1 205 303 IPR037377 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01994 Phco-Chr7 33996864 34000561 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01994 7 33996864 34000561 Phco7g01994 7 33996864 34000561 ECH