Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01987 ATGACTCTTCTTCTCTTCGTGACCGACCAGTCCCTCCTCTGTCGCGCCGCTCTCTTCTGCCACACCACATGTCAACCGCAATCTGATCCTACTACCACCATAAACGAAACTTGTTGTCCCTCTGTCTTCATAGACTCTTTGATGCACGTTCCCTCCTCCGTCACGATGCCTCTTCCGCCACACCACACCACATGTCAATTGCAGTCCGAGACCAGCCCCTCTTTTATCGCACAGCTCTCTTCTGCCACACCACACCACACATGTTTGGCAAGAAGAAGAGAGAAATCAGTGATGGCCACCCAAAACCAAACACACTCTCATCCAGACACCACCATTGACCCAAACACCGGTTTCTGTTCTTCTTCTAGAACCTTCCACAGCCTCCGTCCAAACGTCCTACTCCCTCCGCCGTCTCAGCCACTCTCCCTCGCCGATTACGCCCTCTCCCTCCTCCCCGCCGCCGCCACTTATAAGTCCGCCCTTATCGACGCCACCACCGGCCGCCATCTCTCCTACTCCCTCTTCCTCCGCCAAGTAAAATCCCTCGCCTCTTCCATCCAGTCCCTCACCCCTCTCTCTAAAGGCCACGTGGCGCTAATCCTCACCCCAACCTCGCTACACGTCCCCGTACTCTACTTCTCTCTCCTCTCGCTTGGCGTCACAATCGCACCTGCCAACCCGCTCAGTTCCCCTTCCGAGTTAACTCACCTCATCCACCTAACAAAACCCGCCATCGCCTTTGCCACCTCCGCCGTCGCCACAAACGTCCCCACCCTCAAATTTGGCACCGTTCTCATCGACTCCCCGCTCTTCCTCTCTATGCTCGACGCCAACGGAGACTCACACTCACGCGCTTCCGGAGTCGAACTGAGTCAGTCCGACTCCGCCGCAATTCTCTTCTCCTCGGGCACCACTGGGCGCGTGAAGGGCGTGTTGCTCTCGCACCGGAATCTCATCGCACTCATAGGCGGGTTCTGCCACCTGAGGAACATCCTGAAAGATTCCGACGAAGCGGAGCCGCATCCCCTGTCACTGTTCACGCTGCCGCTGTTCCACGTGTTCGGGTTCTTCATGCTGGTGAGGTCCATCGCTTTGGGGGAGACGCTCGTTCTGATGCATAGATTCGATTTCGAAGGGATGCTCAAAGCCGTGGAGAGGTATAAAATCTCAATGATTCCGGTGTCGCCGCCGCTCGTGGTGGCCCTCGCCAAGTCGGAGCTCGTAAACAAGTACGACCTCAGCTCGCTGCGGATACTCGGTTGCGGCGGCGCGCCGCTCGGGGAGAAGGTCACCGATGACTTCAAAGCCAAATTCCCCAACGTGGAAATTTCCCAGGGCTATGGTCTGACTGAAAGTGGAGGAGGAGCAGCTAGAACGTTGGGGCCTGAGGAGATCAAGCGCCATGGTTCTGTGGGTCGACTATCAGAAAACATGGAGGCCAAGATAGTGGACCCTGTAACTGGAGAGGCATTACTTCCTTGCCAAAAGGGGGAACTGTGGATTCGAGGTCCAACAATCATGAAAGGTTATGTAGGAGATGAGAAGGCGACAGCTGAAACATTGGATTCAGAGGGATGGCTGAAGACGGGTGATCTTTGTTATTTTGACTCTGATGGTTTCCTCTACATTGTAGATAGACTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAACACATACTTCACACCAATCCTGATATTGCCGATGCTGCAGTAGTTCCGTACCCTAATGAAGAAGCAGGACAGATTCCTATGGCCTTTGTAGTAAGAAAACCTGGAAGCAACATCACTGCAGATCAGATCATGGAGTTTGTGGCAAAGCAGGTTTCTCCTTACAAGAAGATACGGCGTGTTTCTTTTGTCAATTCTATCCCAAAATCTCCTGCTGGCAAAATTTTGAGAAGAGAATTAGTTGATTATGCTCTATCCAGTGGTTCATCCAAATTGTGA 1968 0.531 MTLLLFVTDQSLLCRAALFCHTTCQPQSDPTTTINETCCPSVFIDSLMHVPSSVTMPLPPHHTTCQLQSETSPSFIAQLSSATPHHTCLARRREKSVMATQNQTHSHPDTTIDPNTGFCSSSRTFHSLRPNVLLPPPSQPLSLADYALSLLPAAATYKSALIDATTGRHLSYSLFLRQVKSLASSIQSLTPLSKGHVALILTPTSLHVPVLYFSLLSLGVTIAPANPLSSPSELTHLIHLTKPAIAFATSAVATNVPTLKFGTVLIDSPLFLSMLDANGDSHSRASGVELSQSDSAAILFSSGTTGRVKGVLLSHRNLIALIGGFCHLRNILKDSDEAEPHPLSLFTLPLFHVFGFFMLVRSIALGETLVLMHRFDFEGMLKAVERYKISMIPVSPPLVVALAKSELVNKYDLSSLRILGCGGAPLGEKVTDDFKAKFPNVEISQGYGLTESGGGAARTLGPEEIKRHGSVGRLSENMEAKIVDPVTGEALLPCQKGELWIRGPTIMKGYVGDEKATAETLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTNPDIADAAVVPYPNEEAGQIPMAFVVRKPGSNITADQIMEFVAKQVSPYKKIRRVSFVNSIPKSPAGKILRRELVDYALSSGSSKL 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01987 655 Pfam AMP-binding enzyme C-terminal domain 562 637 IPR025110 -
Phco7g01987 655 Gene3D - 132 548 IPR042099 -
Phco7g01987 655 SUPERFAMILY Acetyl-CoA synthetase-like 158 648 - -
Phco7g01987 655 Gene3D - 549 649 IPR045851 -
Phco7g01987 655 Pfam AMP-binding enzyme 158 553 IPR000873 -
Phco7g01987 655 CDD 4CL 135 643 - -
Phco7g01987 655 ProSitePatterns Putative AMP-binding domain signature. 298 309 IPR020845 -
Phco7g01987 655 FunFam 4-coumarate--CoA ligase 2 549 650 - -
Phco7g01987 655 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 118 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01987 Phco-Chr7 33853063 33857496 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01987 7 33853063 33857496 Phco7g01987 7 33853063 33857496 ECH