Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01968 ATGAGAGCTCCATTGAAGCACACCAAGAAGAAAAACGATCTCTTTGAATGCCTTCCCGATGATCTAGTCGTTTTCATTCTCTCTAAACTCAGCTCCACCGCTTCCTCCCCTTCCGATTTCATAAACATCGTCTTAACATGCAAGAGATTAAACCGGTTAGGCCTGCACCGTCTTGTGTTATCCGAAGCTGGGTCTAAAGTGTTCTCCATAAAGCCCAGAACTTGGTCGGAAAAGACTCACACTTTCCTCAAACACTGCGTTAACGCCGGCAACGTGGACGCCTGCTACACTCTCGGAATGATCCGATTTTACTGTCTGGAAAACCGAGGGAGCGGGCTTTCGTTGATGGCGAAGGCGGCTATGAAGCTGCATGCGCCGGCTCTGTACTCGCTGGCGGTGATACAGTTCAATGGCAGCGGCGGCTCCAAACACGACAAGGATCTACGCGCGGGCGTGGCTCTGTCGGCGCGTGCATCGCTGCTCGGCCACATCGACGCGCTTCGGGAGTTGGGCCATTGTCTCCAGGATGGTTACGGCGTGCGGCAGAACGTTGCGGAGGGGAGGCGGATGCTGGTGCAGGCCAACGTGCGGGAGCTGGCGTATGTGTTACGCGAGGTGACTCCTTCTGCTTCCGAATCTCTCATGGTGACGTGGCGGACGCCAATGACGTGTCAGAGAGATGTGACAGCGTTGTTGAGTGACTACGGTTACAGAATTCCGGTACCGGAAGTGCAACCGGTGAATCGTTTTTTAAGAGAGTGGTTTGAATCCGGTAAAGGAAAATTGGAGGAAGGATTGAGGTTATGTTCCCACATTGGATGTGGCCGACCGGAAATTCGACCGCAGGAATTTCGACGCTGTTCTGTTTGTGGGAAAGTTAATTATTGCTCACGTGGATGCCAAGCCATGGATTGGAAGTTAAAGCATAAAATGGAGTGTTCGCCCACTGAACCCTACGCCGAAGGAGACGCTGGCATAGACCTAAATAACGAGTTTGCCATACCAAACGATGCCAGTGACATTTTCCGGAAGAGAAAGCCAACACAGCAGACAGCAGAGGTTCCATCTTGTTTACGTTATCGTTCTTGTCGCCACACCGCAGAGGACCCTTTCCCATTCAAACCCTCATTCATCACCATTTTGACGGTTACCATTGCCCAACTTCCACATCGCTTCTCTTTTCCAACTATTTAA 1194 0.5142 MRAPLKHTKKKNDLFECLPDDLVVFILSKLSSTASSPSDFINIVLTCKRLNRLGLHRLVLSEAGSKVFSIKPRTWSEKTHTFLKHCVNAGNVDACYTLGMIRFYCLENRGSGLSLMAKAAMKLHAPALYSLAVIQFNGSGGSKHDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVRQNVAEGRRMLVQANVRELAYVLREVTPSASESLMVTWRTPMTCQRDVTALLSDYGYRIPVPEVQPVNRFLREWFESGKGKLEEGLRLCSHIGCGRPEIRPQEFRRCSVCGKVNYCSRGCQAMDWKLKHKMECSPTEPYAEGDAGIDLNNEFAIPNDASDIFRKRKPTQQTAEVPSCLRYRSCRHTAEDPFPFKPSFITILTVTIAQLPHRFSFPTI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01968 397 Gene3D Tetratricopeptide repeat domain 74 219 IPR011990 GO:0005515
Phco7g01968 397 SUPERFAMILY HIT/MYND zinc finger-like 267 316 - -
Phco7g01968 397 ProSiteProfiles Zinc finger MYND-type profile. 271 313 IPR002893 -
Phco7g01968 397 PANTHER MYND DOMAIN-CONTAINING 6 323 IPR044508 -
Phco7g01968 397 SUPERFAMILY HCP-like 79 194 - -
Phco7g01968 397 CDD F-box_SF 16 53 - -
Phco7g01968 397 FunFam Predicted protein 261 317 - -
Phco7g01968 397 Gene3D - 263 315 - -
Phco7g01968 397 Pfam MYND finger 274 313 IPR002893 -
Phco7g01968 397 SUPERFAMILY F-box domain 10 62 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01968 Phco-Chr7 33336225 33338503 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01968 7 33336225 33338503 Phco7g01968 7 33336225 33338503 ECH