Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01942 ATGGCGGCAATCAGCAACATCCGTTTACAATTCCCACGGAATTTAAACGATTCAAAGAAGAATGTGAGGTTTTATGCTCCATGCAATATTACTAACGTGTTTAATAATAAACGAAGATTTTTGTCGGTGACCGCAAATTATAGTGATAGTCCTCGAAAAATGGACACTGCCAACAGAGTAAATGTGAATGGAATACACGTGGCAGAGGCTCCTCAAGCAGGAAAGTTGGCCAAAGAAAGTGCAGCAGATGAAGCTATTGTTACCAGCTTGCGTGGAAGGTTTGTGGAGGATAAGTTTGTATTTAGGCAAATTTTTGTTATCAGGTCTTACGAAATTGGACCAGATAAAACTGCCACCATGGAGACACTCATGAATTTTCTTCAGGAAACTGCTTTAAATCATGTGACTAGCTCTGGGATTGGGGGAGAAGGATTTGGAGCAACCCGCGAGATGAGCCTTCGAAAGCTCATTTGGGTTGTTACTCGTATTCAACTTCAAGTTCAGAAATATAACAAATGGGGAGACGAGATTGAAGTTGATACTTGGGTCGATGCAGCAGGAAAGAATGGAATGCGAAGAGATTGGATAATCAGGGATCACTACACCAAAGAGATCATAACAAGAGCCACAAGCACATGGGTGATCATGAATAGACAAACAAGAAGACTTTCCAAGATCCCTGAAGAGGTTAAACAAGAGCTTGTTCCTTTTTACCTAAACAGGCTTGCCGTTCCTACCGAAGAAGTAGATTGTGAGAGAATAGACAAACTCACTGATGACACAGCTGAGAGAATCCGATCTGGATTGGCCCCAAGGTGGAATGACATGGACGCTAACCAGCATGTCAACAATGTGAAATACATTGGATGGATTTTAGAGAGTGTGCCAATTGAAGTTCTAGAGCATTATAATATGACAAGCATGACTTTGGAGTATCGACGTGAATGTACACAATCAAATATTGTGGAATCAATGACGTCTCCAACAGCAAGAGTTTTTGAGTTCAATAATAATTCCAAGAACAGAAAACCGGACCTGCAATATACACACTTGCTTCGTCTGCAACATGATAAAGCAGACGTTGTTCGAGCCAGAACTGAGTGGAATTTCAAGCAAAACCAACAGTGA 1128 0.4122 MAAISNIRLQFPRNLNDSKKNVRFYAPCNITNVFNNKRRFLSVTANYSDSPRKMDTANRVNVNGIHVAEAPQAGKLAKESAADEAIVTSLRGRFVEDKFVFRQIFVIRSYEIGPDKTATMETLMNFLQETALNHVTSSGIGGEGFGATREMSLRKLIWVVTRIQLQVQKYNKWGDEIEVDTWVDAAGKNGMRRDWIIRDHYTKEIITRATSTWVIMNRQTRRLSKIPEEVKQELVPFYLNRLAVPTEEVDCERIDKLTDDTAERIRSGLAPRWNDMDANQHVNNVKYIGWILESVPIEVLEHYNMTSMTLEYRRECTQSNIVESMTSPTARVFEFNNNSKNRKPDLQYTHLLRLQHDKADVVRARTEWNFKQNQQ 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01942 375 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 63 372 IPR045023 GO:0006633|GO:0016297
Phco7g01942 375 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 95 242 IPR029069 -
Phco7g01942 375 Gene3D Hotdog Thioesterase 91 374 - -
Phco7g01942 375 Pfam Acyl-ACP thioesterase 100 369 IPR002864 GO:0006633|GO:0016790
Phco7g01942 375 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 256 368 IPR029069 -
Phco7g01942 375 CDD 4HBT 101 217 - -
Phco7g01942 375 FunFam Acyl-[acyl-carrier-protein] hydrolase 92 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01942 Phco-Chr7 30576009 30577870 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01942 7 30576009 30577870 Phco7g01942 7 30576009 30577870 ECH