Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01889 ATGGAGAACACTTCTGGGTTGTGTGTGTTATGGGTTATACTCCTGTTGGGTTGTGTCATTTCCTCGGAATCTAAGTATATAAGGTATAACACAACATCAACCATCGTCCCTGGCAAGCTCAACGTTCACTTGGTCCCTCACACTCACGACGATGTTGGCTGGTTGAAGACCATTGACCAGTATTATGTTGGTTCCAACAACTCAATTCAGGGAGCATGCGTTCAAAACGTTCTCGATTCCCTGGTACCCGCATTGTTGGCTGACAAGAATCGCAAGTTCATTTATGTTGAACAGGCATTTTTTCAGCGATGGTGGAGAGAACAAAGTGATCTTATTCAGAACATAGTCAAGGAGCTGGTCAAATCTGGTCAATTGGAGTTCATAAATGGAGGCTTTTGTATGCATGACGAGGCTGCTACTCATTACATTGACATGATTGATCAGACAACTCTTGGACATCAATTTCTCAAAGAAGAATTTGGAGTGACTCCGAGAATAGGGTGGCAGATCGATCCATTTGGACATTCTGCTGTGCAGGCCTACTTGTTGGGAGCAGAGGTTGGATTTGACTCTCTATTCTTTGCACGGATTGACTATCAAGACAGAGCAAAGAGAAAAGATGAAAAAACTCTCGAAGTTGTGTGGCGGGGCTCTAAGAGCTTTGGTTCATCATCACAGATATTTTCTGGTGCGTTCCCTGAGAATTATGAACCTCCCAGTAATTTCTACTATGAAGTAAATGACGATTCTCCCATTGTTCAGGATGATGTGAATTTATTTGATTACAATGTCCCTGAAAGAGTAAACGAGTTTGTCGCAGCCGCAATATCACAGGCCAATATTACGCGCACAAATCATATAATGTGGACAATGGGGACAGATTTCAAGTACCAATATGCGCAGAGCTGGTTTCGGCAAATGGATAAGTTTATTCACTACGTTAATCAAGATGGTCGGGTCCATGCCTTATACTCAACCCCATCAATATACACTGATGCCAAACATGCTACAAATGAGGCCTGGCCAATCAAGACTGATGACTACTTTCCCTATGCAGATCGTGTAAATGCATATTGGACAGGGTATTTTACAAGCAGGCCAGCTCTCAAAGGTTATGTCAGACTGATAAGTGGATATTACTTGTCAGCAAGGCAGTTGGAGTATTTCAAAGGGAAGAGTGCCTTAGGTCCAAAAACTGACTCTTTGGCTGAAGCTTTGGCTATTGCTCAACATCATGATGCAGTATCTGGTACAGAAAAGCAGCATGTTGCTGATGATTATGCTAAACGACTTTCAATAGGTTATACAGAGGCTGAGAAAGTTGTTTCAGAATCACTTGGTTGTTTGACAGAAGGAGGAACCAAAACGGGATGTAAGAACCCACAGATTAAATTTCAACAGTGTCCACTTCTGAACATAAGTTACTGTCCTGCATCAGAAATCGACTTCTCCAATGGGAAAAATCTGGTGGTTGTTGTTTACAATCCTCTGGGATGGAAAAGAGAGGATATCATAAGGATTCCGGTTGTCAATGAAAACGTTGGTGTTCGGGATTCCAGTGGAAAAGAAGTCCAATCCCAGCTGGTGCCAATACCTAATGTTTTTCTTGGCTTAAGAAACTATCACACTGTGGCCTACTTGGGAGTGTCTCCGACTGTGAAACCCAAATACTGGCTTGTTTTTCCGGCAGCTGTTCCCCCACTTGGTTTTAGCACTTACTATGTATCTTATGCCAAAAATGAAGCTACTGTTTCAGATAGAGATGCAGCTTACAAGTCAAAGAATTGGAGTGATGTAATTACAGTGGGTCCAGAAAACTTGAGATTAACTTATTCTGTGAAGGAAGGGAAACTTACTGAATATAACAACTACAGAAGCAAGGTCAAAGAATCCGTAGAGCAGACATATAAATTTTACGCGGGCACAAGATTTGATGCACAGGCATCTGGAGCATACATTTTTAGACCTGATGGTTCACCATCTCCCATCAATTCCAACAGCAAGTCTCCTCTCACAGTTTTTCGGGGACCAATTGTGCATGAAGTGCATCAACAGATCAATTCATGGATATACCAGACTACTAGACTGTACAAGGGCAAAGAACATGCTGAAGTTGAGTTTATTGTTGGTCCTATACCCATTGATGATGGAGTTGGGAAGGAAATTGCAACGGAGATTAAAACAAATTTGGCAAGCAATAAAACCTTCTATACTGATTCCAATGGACGTGATTTCATTGAACGTGTTCGAGACTATAGAAAAGACTGGCACTTGGAAGTGAATCAACCTGTTGCTGGAAATTATTACCCAATCAACCTTGGGATTTACCTGAAAGATAAAAGCAAAGAGTTTTCTATTTTGGTAGATAGAGCTGTGGGGGGCTCCAGCATCATAGATGGACAATTGGAACTAATGGTTCATAGGAGGTTACTTGCAGATGATTCCAGAGGTGTTGCAGAGGCACTGAATGAAACAGTTTGCATCCATAATACATGCAGAGGGTTAACTGTGCTAGGGAAATACTATTTCAGAATTGATCCTGTGGGAAAGGGTGGTAGATGGCGTCGATCATTTGGTCAGGAGATATACTCACCCTTACTTTTAGCCTTCACAGAGAGTGACGCTCACTGGGGAGATTCTCATGTCACAACCTTCTCGGGAATAGATTCCTCATACAAGTTACCAGATAACGTTGCAATAATAACCCTCCAGGATCTGGGTGATGGAAAAGTTCTCCTTCGGCTGGCACACTTATACGAGATTGACGAGGACAAGTATCTTTCAGTTAAGGCAACTGTAGAACTGAAAAAGGTGTTTTCCAGCAAACAGATAAACAAAATAACTGAAGTGAGCCTATCAGCTAACCAGGAAAGAGCAGAAATGGAGAGAAAGAGATTGGTTTGGAAAGTTAAAGGGTCACCTCCAGAACCTAAGGTGTGGAGGGGAGGAGCAGTAAATCCAGAAAATCTAATTGTAGAACTTGCTCCCATGGAAATTCGGACTTTTGTTATCAGTTTTAGGGCTTAA 3027 0.4196 MENTSGLCVLWVILLLGCVISSESKYIRYNTTSTIVPGKLNVHLVPHTHDDVGWLKTIDQYYVGSNNSIQGACVQNVLDSLVPALLADKNRKFIYVEQAFFQRWWREQSDLIQNIVKELVKSGQLEFINGGFCMHDEAATHYIDMIDQTTLGHQFLKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFARIDYQDRAKRKDEKTLEVVWRGSKSFGSSSQIFSGAFPENYEPPSNFYYEVNDDSPIVQDDVNLFDYNVPERVNEFVAAAISQANITRTNHIMWTMGTDFKYQYAQSWFRQMDKFIHYVNQDGRVHALYSTPSIYTDAKHATNEAWPIKTDDYFPYADRVNAYWTGYFTSRPALKGYVRLISGYYLSARQLEYFKGKSALGPKTDSLAEALAIAQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVSESLGCLTEGGTKTGCKNPQIKFQQCPLLNISYCPASEIDFSNGKNLVVVVYNPLGWKREDIIRIPVVNENVGVRDSSGKEVQSQLVPIPNVFLGLRNYHTVAYLGVSPTVKPKYWLVFPAAVPPLGFSTYYVSYAKNEATVSDRDAAYKSKNWSDVITVGPENLRLTYSVKEGKLTEYNNYRSKVKESVEQTYKFYAGTRFDAQASGAYIFRPDGSPSPINSNSKSPLTVFRGPIVHEVHQQINSWIYQTTRLYKGKEHAEVEFIVGPIPIDDGVGKEIATEIKTNLASNKTFYTDSNGRDFIERVRDYRKDWHLEVNQPVAGNYYPINLGIYLKDKSKEFSILVDRAVGGSSIIDGQLELMVHRRLLADDSRGVAEALNETVCIHNTCRGLTVLGKYYFRIDPVGKGGRWRRSFGQEIYSPLLLAFTESDAHWGDSHVTTFSGIDSSYKLPDNVAIITLQDLGDGKVLLRLAHLYEIDEDKYLSVKATVELKKVFSSKQINKITEVSLSANQERAEMERKRLVWKVKGSPPEPKVWRGGAVNPENLIVELAPMEIRTFVISFRA 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01889 1008 FunFam Alpha-mannosidase 477 601 - -
Phco7g01889 1008 Gene3D - 882 1008 - -
Phco7g01889 1008 Gene3D Glycoside hydrolase family 38, central domain 400 454 IPR037094 GO:0004559|GO:0006013
Phco7g01889 1008 SUPERFAMILY Glycoside hydrolase/deacetylase 29 353 IPR011330 GO:0005975
Phco7g01889 1008 FunFam Alpha-mannosidase 40 320 - -
Phco7g01889 1008 Pfam Glycosyl hydrolases family 38 N-terminal domain 41 352 IPR000602 GO:0004559|GO:0006013
Phco7g01889 1008 FunFam Alpha-mannosidase 399 455 - -
Phco7g01889 1008 Gene3D Glycoside hydrolase family 38, central domain 321 399 IPR037094 GO:0004559|GO:0006013
Phco7g01889 1008 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 897 1002 IPR041147 -
Phco7g01889 1008 Pfam Alpha mannosidase middle domain 357 449 IPR015341 GO:0004559|GO:0006013
Phco7g01889 1008 PANTHER ALPHA-MANNOSIDASE 12 1006 - -
Phco7g01889 1008 FunFam Alpha-mannosidase 601 864 - -
Phco7g01889 1008 Pfam Glycosyl hydrolases family 38 C-terminal domain 604 816 IPR011682 GO:0004559|GO:0006013
Phco7g01889 1008 FunFam Alpha-mannosidase 883 1008 - -
Phco7g01889 1008 Gene3D - 600 864 - -
Phco7g01889 1008 FunFam Alpha-mannosidase 319 398 - -
Phco7g01889 1008 CDD GH38N_AMII_LAM_like 40 316 - -
Phco7g01889 1008 Gene3D - 477 599 IPR013780 -
Phco7g01889 1008 SUPERFAMILY Galactose mutarotase-like 462 1006 IPR011013 GO:0003824|GO:0005975|GO:0030246
Phco7g01889 1008 SMART Alpha_mann_mid_2 357 431 IPR015341 GO:0004559|GO:0006013
Phco7g01889 1008 Gene3D Glycoside hydrolase 38, N terminal domain 40 320 IPR027291 -
Phco7g01889 1008 SUPERFAMILY Families 57/38 glycoside transferase middle domain 356 450 IPR028995 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01889 Phco-Chr7 22250061 22258606 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01889 7 22250061 22258606 Phco7g01889 7 22250061 22258606 ECH