Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01762 ATGACGCAATCGCAATCCACCGCCGCTACTTCTCCTCCCTCACGAGTCCTCCTCATCTCCGCCGGCGCCAGCCACTCCGTCGCTCTTCTCTCTGGGAGTGTTGTCTGCTCGTGGGGTCGCGGAGAGGATGGACAGTTAGGCCATGGTGACACCGATGATAGACCTTTGCCTACACAGCTCAGTGCATTGGATGCTCAGCAAATAGATTCCATTGCCTGTGGAGCTGATCACACCCTTGCCTACTCCGAGTCACGGAATGAACTCTATAGTTGGGGATGGGGTGATTTTGGAAGGCTGGGTCATGGTAATTCTAGTGATTTGCTCATTCCTCAGCCTATTGTAGCATTACAAGGTCTAAGGATAAGGCAAATTGCCTGTGGGGATACTCATTGTCTGGCAGTTACCATGGAAGGCGAGGTTCAGAGTTGGGGGAGGAATCAAAATGGTCAACTTGGACTTGGCACCACAGAAGATTCTCTTGTGCCACAAAAGATTAAAACATTTCAGGAAGTACCAATCAAAATGGTTGCAGCAGGCGCAGAACACAGTGTAGCTATTACTGAAAATGGAGAACTGTATGGATGGGGTTGGGGCCGATATGGAAATCTGGGGTTGGGAGATAGAAATGATCGCTGGATTCCTGAGAAAGTTTCTTCTATTGAGTGTGACAAGATGGTCATGGTTGCTTGTGGTTGGCGGCATACAATATCTGTTTCATCTTTTGGTGGCTTATACACATATGGGTGGAGCAAATATGGCCAGCTAGGTCATGGAAATTTTGAGGATTCTCTTGTGCCGCACAAGCTTCAAGCCCTGAGTGGCGAGTTAATCTGTCAGGTATCAGGTGGTTGGAGGCATAGTATGGCACTTACATCCACTGGACTACTCTATGGATGGGGTTGGAATAAGTTTGGACAGGTTGGAGTCGGTGACAATGTTGATCGCTGCTCTCCTGTACAAGTGAAGTTCCCCCATGATCAGAAAATAGTTCAGATCTCATGTGGGTGGAGGCACACAATTGCTGTAACTGACAAGAACAATGTATATTCTTGGGGAAGAGGCACAAATGGCCAACTTGGTCATGGGGATACCATTGACCGGAATTCTCCAAAGATTATTGAAGCTTTGAGTGTGGATGGATCTTCTGGGCAGCAAGTCAAAATAGAATCCTCAAACACTGATCTATTGTCAGGGAAAAGCGGTGCCTCCTTGTCTGAGAGATATGCAGTTGTTCCGGATGAAACTGTCTCAGGACAGACTGCTAGTTCGAGCAGTGGAGATAGGCTTGATATCAGTGTCCCTGAAAGTGATGTTAAACGGATCCGCGTTTGA 1332 0.4767 MTQSQSTAATSPPSRVLLISAGASHSVALLSGSVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIVALQGLRIRQIACGDTHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIKTFQEVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSIECDKMVMVACGWRHTISVSSFGGLYTYGWSKYGQLGHGNFEDSLVPHKLQALSGELICQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKIVQISCGWRHTIAVTDKNNVYSWGRGTNGQLGHGDTIDRNSPKIIEALSVDGSSGQQVKIESSNTDLLSGKSGASLSERYAVVPDETVSGQTASSSSGDRLDISVPESDVKRIRV 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01762 443 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 280 290 IPR000408 -
Phco7g01762 443 SUPERFAMILY RCC1/BLIP-II 14 220 IPR009091 -
Phco7g01762 443 PRINTS Chromosome condensation regulator RCC1 signature 138 154 IPR000408 -
Phco7g01762 443 PRINTS Chromosome condensation regulator RCC1 signature 34 50 IPR000408 -
Phco7g01762 443 PRINTS Chromosome condensation regulator RCC1 signature 176 192 IPR000408 -
Phco7g01762 443 PRINTS Chromosome condensation regulator RCC1 signature 283 301 IPR000408 -
Phco7g01762 443 PRINTS Chromosome condensation regulator RCC1 signature 88 104 IPR000408 -
Phco7g01762 443 PRINTS Chromosome condensation regulator RCC1 signature 341 362 IPR000408 -
Phco7g01762 443 PRINTS Chromosome condensation regulator RCC1 signature 192 206 IPR000408 -
Phco7g01762 443 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 242 293 IPR000408 -
Phco7g01762 443 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 19 29 IPR000408 -
Phco7g01762 443 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 294 345 IPR000408 -
Phco7g01762 443 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 138 189 IPR000408 -
Phco7g01762 443 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 228 238 IPR000408 -
Phco7g01762 443 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 86 137 IPR000408 -
Phco7g01762 443 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 87 403 - -
Phco7g01762 443 MobiDBLite consensus disorder prediction 415 430 - -
Phco7g01762 443 MobiDBLite consensus disorder prediction 414 443 - -
Phco7g01762 443 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 332 342 IPR000408 -
Phco7g01762 443 Gene3D - 12 388 IPR009091 -
Phco7g01762 443 Pfam Regulator of chromosome condensation (RCC1) repeat 137 186 IPR000408 -
Phco7g01762 443 Pfam Regulator of chromosome condensation (RCC1) repeat 35 80 IPR000408 -
Phco7g01762 443 Pfam Regulator of chromosome condensation (RCC1) repeat 242 290 IPR000408 -
Phco7g01762 443 Pfam Regulator of chromosome condensation (RCC1) repeat 347 377 IPR000408 -
Phco7g01762 443 Pfam Regulator of chromosome condensation (RCC1) repeat 189 236 IPR000408 -
Phco7g01762 443 Pfam Regulator of chromosome condensation (RCC1) repeat 87 134 IPR000408 -
Phco7g01762 443 Pfam Regulator of chromosome condensation (RCC1) repeat 294 342 IPR000408 -
Phco7g01762 443 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 176 186 IPR000408 -
Phco7g01762 443 SUPERFAMILY RCC1/BLIP-II 161 377 IPR009091 -
Phco7g01762 443 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 346 399 IPR000408 -
Phco7g01762 443 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 190 241 IPR000408 -
Phco7g01762 443 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 33 84 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01762 Phco-Chr7 17876010 17881967 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01762 7 17876010 17881967 Phco7g01762 7 17876010 17881967 ECH