Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01751 ATGAAATTTTGGTTACTTGGGGCGGTGTTGCTGCTCACAGTCACAGTGGCCTCGTGTGGCAATGTGAGCTACGATGGTCGTTCCCTCATCATCGATGGCCAACGCAAGCTTCTTATCTCTGCTTCCATTCATTACCCTCGAAGCGTTCCTGCGATGTGGCCTGGTCTTGTTCAAACAGCGAAGGAAGGCGGGGTAGATGTGATTGAAACCTATGTTTTCTGGAATGGCCATGAGCTTTCTCCAGGCAATTATTACTTTGGAGGAAGGTTTGATCTGGTCAAGTTTGCGAAGACTGTTCAGCAGGCTGGGATGTTCTTGATTCTTCGAATAGGCCCATTTGTTGCTGCAGAATGGAATTTTGGTGGTGTGCCGGTGTGGCTGCATTATGTTCCAGGCACGGTATTCCGGACTTACAATCAGCCTTTTATGTATCATATGCAGAAGTTTACAACCTACATAGTGAACCTTATGAAGCAAGAGAAGCTTTTTGCTTCTCAAGGGGGTCCCATAATCTTAGCTCAGATAGAAAATGAATATGGATACTATGAAAATTTTTATAAAGAGAATGGTAAGAAATATGCCTTGTGGGCTGCAAAGATGGCGGTGTCTCAAAATACAGGTGTCCCTTGGATAATGTGCCAACAATGGGATGCTCCAGATCCTGTGATTGATACATGCAATTCATTCTACTGTGACCAATTTAAACCCACTTCCCCAAATAGGCCCAAAATTTGGACCGAGAACTGGCCTGGATGGTTTAAGACTTTTGGGGGCAGAGATCCTCACAGGCCAGCAGAAGATGTTGCATTTTCTGTTGCTCGTTTCTTCCAGAAAGGTGGAAGTGTACACAATTACTACATGTATCATGGAGGAACAAATTTTGGGCGAACAGCTGGTGGTCCATTCATTACTACAAGTTATGACTATGATGCCCCGATAGATGAGTATGGGTTACCTAGACTTCCAAAATGGGGACATCTTAAGGAACTTCATAGAGCTATCAAGTTATGTGAGCATGTACTGCTTAACGGGAAATCGGTTAACGTCTCCCTTGGTCCTTCTGTGGAGGTTGATGTCTATACTGACTCATCCGGAGCATGCGCTGCCTTTATTTCTAATGCCGATGATAAAAATGATAGAACAGTGGAATTTCGGAATACATCATATCACTTGCCGGCTTGGTCAGTTAGCATTCTTCCTGATTGCAAGAATGTAGTGTTCAACACAGCGAAGGTTAATTCCCAGACAAATGTTGTTGCAATGATTCCCGGAAGTTTGCAGCAATCAAATAAAGGTGTAAATTCTTTGAAATGGGACATTGTGAAGGAGAAGCCAGGAATCTGGGGGACCGCAGACTTTGTCAAAAATGGTTTTGTTGATCTCATCAATACCACCAAAGATACCACTGACTACCTATGGCATACGACGAGTATATATGTTGGTGAAAATGAAGAATTCTTAAAAAAGGGAAGCAAACCAGTTCTTCTAATTGAGTCTACAGGTCATGCTCTCCATGCTTTTGTGAATCAGGAATATCAAGGTACTGGTACTGGAAATGGTACACATTCACCATTCACTTTCAAGAATCCCATCTCCCTCCGAGCAGGGAAAAATGAAATTGCTTTGTTGTGCTTGACAGTTGGCTTACAGACAGCTGGACCCTTTTATGACTTCGTGGGGGCAGGACTCACAAGTGTGAAGATTGAGGGACTGAACAATGGGACAATAGACTTGTCTTCATATGCTTGGACTTACAAGATTGGAGTGCAAGGAGAACACCTAAAGCTAAACCAGGGAGATGGGTTGAATAATGTGAACTGGACATCTACATCAGAACCACCGAAAATGCAGCCATTGACATGGTACAAGGCTATTGTGGATGCTCCACCTGGAGATGAACCAGTTGGATTGGATATGTTACATATGGGCAAAGGTCTTGCATGGTTAAATGGTGAGGAAATAGGAAGATATTGGCCTAGGAAAAGTGAATTCAAGAGTGAAGACTGTGTGAAAGAATGTGATTACCGAGGCAAATTTAATCCCGACAAATGTGACACTGGTTGTGGAGAACCAACACAGAGATGGTACCATGTTCCACGATCTTGGTTCAAACCATCAGGAAATATTCTTGTTCTTTTTGAGGAAAAAGGTGGAGAACCAGATAAGATTAGTTTTGTGAGGCGTAAAATATCTGGAGCATGTGCCCTAGTTGCTGAGGATTACCCCTCCGTGGGACTCCTTTCTCAGGGTGAAGATAAAATACAGAATAACAAAAACATTCCTTTTGCTCGTTTGACGTGCCCCAGTAACACTCATATATCTGCTGTGAAGTTTGCTAGTTTTGGAACTCCCTCTGGATCATGTGGATCTTACCTCAAGGGAGATTGCCATGATCCCAATTCTAGTATAGTTGTTGAAAAGGCGTGCCTAAACAAAAACGACTGTGTCATAAAATTAACTGAAGAGAATTTCAAAACCAACTTGTGTCCTGGTTTATCAAGGAAACTTGCAGTGGAAGCGATTTGTAGTTGA 2532 0.4285 MKFWLLGAVLLLTVTVASCGNVSYDGRSLIIDGQRKLLISASIHYPRSVPAMWPGLVQTAKEGGVDVIETYVFWNGHELSPGNYYFGGRFDLVKFAKTVQQAGMFLILRIGPFVAAEWNFGGVPVWLHYVPGTVFRTYNQPFMYHMQKFTTYIVNLMKQEKLFASQGGPIILAQIENEYGYYENFYKENGKKYALWAAKMAVSQNTGVPWIMCQQWDAPDPVIDTCNSFYCDQFKPTSPNRPKIWTENWPGWFKTFGGRDPHRPAEDVAFSVARFFQKGGSVHNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLPRLPKWGHLKELHRAIKLCEHVLLNGKSVNVSLGPSVEVDVYTDSSGACAAFISNADDKNDRTVEFRNTSYHLPAWSVSILPDCKNVVFNTAKVNSQTNVVAMIPGSLQQSNKGVNSLKWDIVKEKPGIWGTADFVKNGFVDLINTTKDTTDYLWHTTSIYVGENEEFLKKGSKPVLLIESTGHALHAFVNQEYQGTGTGNGTHSPFTFKNPISLRAGKNEIALLCLTVGLQTAGPFYDFVGAGLTSVKIEGLNNGTIDLSSYAWTYKIGVQGEHLKLNQGDGLNNVNWTSTSEPPKMQPLTWYKAIVDAPPGDEPVGLDMLHMGKGLAWLNGEEIGRYWPRKSEFKSEDCVKECDYRGKFNPDKCDTGCGEPTQRWYHVPRSWFKPSGNILVLFEEKGGEPDKISFVRRKISGACALVAEDYPSVGLLSQGEDKIQNNKNIPFARLTCPSNTHISAVKFASFGTPSGSCGSYLKGDCHDPNSSIVVEKACLNKNDCVIKLTEENFKTNLCPGLSRKLAVEAICS 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01751 843 SUPERFAMILY (Trans)glycosidases 22 338 IPR017853 -
Phco7g01751 843 CDD Gal_Rha_Lectin_BGal 761 842 - -
Phco7g01751 843 FunFam Beta-galactosidase 578 669 - -
Phco7g01751 843 ProSiteProfiles SUEL-type lectin domain profile. 761 843 IPR000922 GO:0030246
Phco7g01751 843 FunFam Beta-galactosidase 286 414 - -
Phco7g01751 843 SUPERFAMILY Galactose-binding domain-like 583 734 IPR008979 -
Phco7g01751 843 Gene3D - 753 843 IPR043159 -
Phco7g01751 843 Pfam Glycosyl hydrolases family 35 28 333 IPR031330 -
Phco7g01751 843 Pfam Beta-sandwich domain in beta galactosidase 341 412 IPR041392 -
Phco7g01751 843 FunFam Beta-galactosidase 755 843 - -
Phco7g01751 843 PRINTS Glycosyl hydrolase family 35 signature 281 296 IPR001944 GO:0004553|GO:0005975
Phco7g01751 843 PRINTS Glycosyl hydrolase family 35 signature 165 180 IPR001944 GO:0004553|GO:0005975
Phco7g01751 843 PRINTS Glycosyl hydrolase family 35 signature 53 71 IPR001944 GO:0004553|GO:0005975
Phco7g01751 843 PRINTS Glycosyl hydrolase family 35 signature 108 127 IPR001944 GO:0004553|GO:0005975
Phco7g01751 843 PRINTS Glycosyl hydrolase family 35 signature 617 631 IPR001944 GO:0004553|GO:0005975
Phco7g01751 843 PRINTS Glycosyl hydrolase family 35 signature 644 660 IPR001944 GO:0004553|GO:0005975
Phco7g01751 843 PRINTS Glycosyl hydrolase family 35 signature 301 317 IPR001944 GO:0004553|GO:0005975
Phco7g01751 843 PRINTS Glycosyl hydrolase family 35 signature 32 49 IPR001944 GO:0004553|GO:0005975
Phco7g01751 843 PRINTS Glycosyl hydrolase family 35 signature 244 259 IPR001944 GO:0004553|GO:0005975
Phco7g01751 843 PANTHER BETA-GALACTOSIDASE RELATED 14 743 IPR001944 GO:0004553|GO:0005975
Phco7g01751 843 FunFam Beta-galactosidase 18 337 - -
Phco7g01751 843 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 167 179 IPR019801 GO:0004553|GO:0005975
Phco7g01751 843 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Phco7g01751 843 Gene3D - 589 734 - -
Phco7g01751 843 SUPERFAMILY Galactose-binding domain-like 396 551 IPR008979 -
Phco7g01751 843 Pfam Galactose binding lectin domain 765 842 IPR000922 GO:0030246
Phco7g01751 843 Gene3D Glycosidases 20 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01751 Phco-Chr7 17684719 17693676 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01751 7 17684719 17693676 Phco7g01751 7 17684719 17693676 ECH