Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01750 ATGGAAAAGTGGGTGGTTTTGGTGATGCTGTTATTGTCATGGAAAACAAGGGAAGGTTTTGGTGCTAAAGCTGAGATAACATACGATGGAAGATCTCTCATCATTGATGGCCAGAGAAAAATTCTCTTCTCTGGTTCAATTCATTATTCTCGCAGTACTCCTCAGATGTGGCCAGATTTGATAGCGAAAGCAAAGGAAGGAGGAGTGGATGTGATTCAAACCTATGTGTTTTGGAATCTTCACGAGCCCCAACTCGGAAAGTATGATTTCAGTGGGAGAAATGACCTGGTGGGATTTATAAAGGAAATTGAAGCTCAAGGAATGTATGTTTGCCTCAGGATTGGACCTTTCATAGAGAGTGAATGGACATATGGGGGTTTTCCTTTCTGGTTACATGATATCCCTGGCATTGTCTACCGAACGGATAATGAGCCATTCAAGTTCTACATGCAAAATTTTACCACAAAAATTGTGAACATGATGAAAGCAGAGAGCTTATATGCTTCCCAAGGAGGACCAATTATACTGTCACAGATTGAAAATGAATACCAAAATATCCAAGGGGCATTTGGCACAGCAGGATCACAGTATGTTCAATGGGCTGCAAAAATGGCAGTGGGACTTGACACTGGCGTTCCATGGATTATGTGCAAACAAACTGATGCTCCTGATCCTATGATAAACACATGCAATGGCATGAGATGTGGAGAAACTTTCAGTGGACCAAATTCCCCCAATAAACCTGCCTTCTGGACTGAGAATTGGACATCTTTCTATCAAGTATATGGTGCACTGCCATACATAAGGTCTGCTGAAGACATAGCATTTCATGTCACCCTTTTTGTTGCAAGAAATGGAAGCTATATCAACTATTATATGTACCATGGAGGAACCAACTTTGGGAGAACAGGCTCTGCTTACGTTATAACAGCCTATTATGATCAAGCCCCACTTGATGAATATGGTTTGCTCAGGCAACCCAAGTGGGGACATCTCAAGCAGTTACATACTGTAATAAAGTCTTGCTCTACCACTTTACTACAAGGAGTGCAGAGGAACTTCTCTTTAGGTCAACTACAGGAAGGTTATGTCTTTGAAGAAGAAAAAGGAGAATGTGTTGCATTTCTTATAAACAATGATAGAGAAAATAAGGTCACTGTGCAATTCCGCAACAGATCATACGAATTGCTCCCCAAGTCCATAAGCATCTTACCAGACTGTCAAAATGTTACTTTCAACACTGCAAATGTAAATACCACAAGCAACAGAAGGATCATTAGTCCTAAACAAAACTTCAGCTCAGTGGATGTTTGGAAGCAATTCCAAGATGTCATTCCAAGCTTTGATGACACCTCACTAAAATCAAATTCATTTTTAGAGCAAATGAATACAACCAAAGACGAATCGGATTACCTTTGGTATACTCACAGGTTTGAAAACAATCTATCTTGCTGCAAACCAACACTTAGTGTTAAGTCTGCTGCTCATGTTGCCCATGCTTTTGTGAACAACACATACATAGGTGGGGCACATGGAAATCATGATGTGAAATCATTCACCTTAGAGCTCCCAGTTACATTACATGAAGGGACAAACAACCTTTCCATACTTAGCGTTATGGTTGGACTTCCGGATTCAGGGGCATTTCTTGAAAGAAGGTTTGCTGGTTTAATCAGTGTGCAACTTCAGTGCAGCGAAGAAGAGTCTCTTAATTTGACTAATTCCTTGTGGGGTTATAAGGTTGGATTACTGGGGGAGCAATTACAAGTATATAAAGGACAAAATAGCAGTGATATTGAATGGAGGGAACTGAGGAATATTAGGGAACAAACGCTCATTTGGTACAAGACAACATTTGACACACCAGAGGGAGATGACCCTGTTGTGTTGGACCTTAGTTCAATGGGAAAAGGTGAAGCTTGGGTAAATGGACAAAGCATTGGTCGTTATTGGATCTTGTTTCATGATTCCAAAGGCAACCCTTCACAATCACTGTATCATGTGCCTCGGTCTTTCCTTCAGGACTCTGAAAACGTTTTGGTTTTGGTGGATGAAGGTGGTGGGAACCCTCTTGGCATCTCCTTGGACACTGTTTCAGTCACAGATTTACATCAAAACTTTTCTAAATTATCATTTCCCTCTTCTGCTTAG 2151 0.4082 MEKWVVLVMLLLSWKTREGFGAKAEITYDGRSLIIDGQRKILFSGSIHYSRSTPQMWPDLIAKAKEGGVDVIQTYVFWNLHEPQLGKYDFSGRNDLVGFIKEIEAQGMYVCLRIGPFIESEWTYGGFPFWLHDIPGIVYRTDNEPFKFYMQNFTTKIVNMMKAESLYASQGGPIILSQIENEYQNIQGAFGTAGSQYVQWAAKMAVGLDTGVPWIMCKQTDAPDPMINTCNGMRCGETFSGPNSPNKPAFWTENWTSFYQVYGALPYIRSAEDIAFHVTLFVARNGSYINYYMYHGGTNFGRTGSAYVITAYYDQAPLDEYGLLRQPKWGHLKQLHTVIKSCSTTLLQGVQRNFSLGQLQEGYVFEEEKGECVAFLINNDRENKVTVQFRNRSYELLPKSISILPDCQNVTFNTANVNTTSNRRIISPKQNFSSVDVWKQFQDVIPSFDDTSLKSNSFLEQMNTTKDESDYLWYTHRFENNLSCCKPTLSVKSAAHVAHAFVNNTYIGGAHGNHDVKSFTLELPVTLHEGTNNLSILSVMVGLPDSGAFLERRFAGLISVQLQCSEEESLNLTNSLWGYKVGLLGEQLQVYKGQNSSDIEWRELRNIREQTLIWYKTTFDTPEGDDPVVLDLSSMGKGEAWVNGQSIGRYWILFHDSKGNPSQSLYHVPRSFLQDSENVLVLVDEGGGNPLGISLDTVSVTDLHQNFSKLSFPSSA 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01750 716 FunFam Beta-galactosidase 22 343 - -
Phco7g01750 716 Pfam Beta-galactosidase jelly roll domain 608 683 IPR025300 -
Phco7g01750 716 SUPERFAMILY Galactose-binding domain-like 401 557 IPR008979 -
Phco7g01750 716 PANTHER BETA-GALACTOSIDASE RELATED 13 708 IPR001944 GO:0004553|GO:0005975
Phco7g01750 716 SUPERFAMILY Galactose-binding domain-like 576 704 IPR008979 -
Phco7g01750 716 Gene3D Glycosidases 22 343 - -
Phco7g01750 716 SUPERFAMILY (Trans)glycosidases 25 342 IPR017853 -
Phco7g01750 716 Gene3D - 437 573 - -
Phco7g01750 716 Gene3D - 580 707 - -
Phco7g01750 716 Pfam Glycosyl hydrolases family 35 32 337 IPR031330 -
Phco7g01750 716 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Phco7g01750 716 FunFam Beta-galactosidase 292 419 - -
Phco7g01750 716 FunFam Beta-galactosidase 579 704 - -
Phco7g01750 716 Pfam Beta-sandwich domain in beta galactosidase 346 417 IPR041392 -
Phco7g01750 716 PRINTS Glycosyl hydrolase family 35 signature 610 624 IPR001944 GO:0004553|GO:0005975
Phco7g01750 716 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Phco7g01750 716 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Phco7g01750 716 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Phco7g01750 716 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Phco7g01750 716 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Phco7g01750 716 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Phco7g01750 716 PRINTS Glycosyl hydrolase family 35 signature 637 653 IPR001944 GO:0004553|GO:0005975
Phco7g01750 716 PRINTS Glycosyl hydrolase family 35 signature 306 322 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01750 Phco-Chr7 17671761 17678289 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01750 7 17671761 17678289 Phco7g01750 7 17671761 17678289 ECH