Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01745 ATGAAATCCGCGAATTGGGGATTATTTCTGCTGCTGCTGCTCTTCTTCACCTCCTCTACTTCTTCAGCATGGTTCGGTAGCAAACACAAAAGTTCCGGTGCAAGTTCAAGCTCAAGCGGAAGGATTCGTTCCGATGAAGCCTCCTCGTCATCGTCATCGTCATCACCCTTCCTACTAAACCGTTTCCGTTCCGGTTCTGCCGTGGTGTTCCCCGTTCACGGCAATGTTTACCCTGTCGGGTTTTATAATGTCACTCTCAACATCGGGCAACCACCAAGGCCATATTTTCTTGATATTGACACAGGTAGCGACCTTACGTGGCTTCAATGTGATGCCCCTTGTTCCCGTTGCTCTCAGACACCCCATCCACTTTATAGGCCCAGCAATGACCTAGTGCCATGCAGGCATGCCCTTTGCGCATCCTTGCACCAAACTGATAACTACGACTGCGAAGTTCCACATCAATGTGACTATGAAGTGGAGTATGCAGATCATTACTCATCGCTTGGTGTTCTTCTCCATGACGTCTACACTCTCAACTTTACAAATGGAGTCCAACTTAAAGTTCGTATGGCCCTTGGATGCGGATACGATCAGATTTTTCCAGATCCTTCTCATCACCCGTTAGATGGAATGCTTGGCCTTGGCAGGGGAAAAACTAGCTTGACATCACAGTTGAACAGTCAGGGTTTGGTCCGAAATGTGGTTGGACACTGTTTGAGTGCACAGGGAGGAGGGTATATCTTCTTTGGTGAAATTTATGATTCTTCTAGACTAACTTGGACTCCAATGTCATCCAGAGATTACAAACATTACTCAGCAGCAGGGGCAGCTGAACTCCTTTTTGGAGGGAAGAGGACTGGGGTTGGAAATCTTCATGCTGTTTTTGACACTGGGAGTTCTTACACCTACTTCAACTCTAATGCTTACCAAGCATTAATCTCTTGGTTGAGGAAGGAATCAGGTGGGAAGCCCCTAAAAGAAGCACACGGTGATCAAACTCTCCCTCTCTGTTGGCATGGCAAAAGACCTTTCAAAAGCATGTATGAAGTGAGAAAATACTTCAAGCCAATCACGCTTAGTTTCAGCAGCAATGGAAGAAGTAAAGCTCAGTTTGAAATCCCTCCTGAAGGATATCTAATAATATCTAATATGGGAAATGTTTGCTTGGGCATTCTAAACGGCTCTGAAGTAGGGATGGGTGATCTGAACCTAATAGGAGACATATCCATGCTAAACAAAGTCATGGTATTCGACAACGACAAGCAGTTGATCGGTTGGACACCAGCAGATTGTGATCGGGTTCCAAAATCCAGAGATGTCAGCATTTGA 1332 0.4572 MKSANWGLFLLLLLFFTSSTSSAWFGSKHKSSGASSSSSGRIRSDEASSSSSSSSPFLLNRFRSGSAVVFPVHGNVYPVGFYNVTLNIGQPPRPYFLDIDTGSDLTWLQCDAPCSRCSQTPHPLYRPSNDLVPCRHALCASLHQTDNYDCEVPHQCDYEVEYADHYSSLGVLLHDVYTLNFTNGVQLKVRMALGCGYDQIFPDPSHHPLDGMLGLGRGKTSLTSQLNSQGLVRNVVGHCLSAQGGGYIFFGEIYDSSRLTWTPMSSRDYKHYSAAGAAELLFGGKRTGVGNLHAVFDTGSSYTYFNSNAYQALISWLRKESGGKPLKEAHGDQTLPLCWHGKRPFKSMYEVRKYFKPITLSFSSNGRSKAQFEIPPEGYLIISNMGNVCLGILNGSEVGMGDLNLIGDISMLNKVMVFDNDKQLIGWTPADCDRVPKSRDVSI 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01745 443 Gene3D Acid Proteases 59 250 IPR021109 -
Phco7g01745 443 Gene3D Acid Proteases 251 436 IPR021109 -
Phco7g01745 443 MobiDBLite consensus disorder prediction 23 55 - -
Phco7g01745 443 SUPERFAMILY Acid proteases 74 435 IPR021109 -
Phco7g01745 443 PANTHER ASPARTYL PROTEASES 9 426 IPR001461 GO:0004190|GO:0006508
Phco7g01745 443 ProSiteProfiles Peptidase family A1 domain profile. 82 428 IPR033121 -
Phco7g01745 443 FunFam Aspartic proteinase Asp1 isoform A 255 436 - -
Phco7g01745 443 Pfam Xylanase inhibitor N-terminal 82 251 IPR032861 -
Phco7g01745 443 FunFam Aspartyl protease family protein 59 252 - -
Phco7g01745 443 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 294 305 IPR001969 GO:0004190|GO:0006508
Phco7g01745 443 PRINTS Pepsin (A1) aspartic protease family signature 88 108 IPR001461 GO:0004190|GO:0006508
Phco7g01745 443 PRINTS Pepsin (A1) aspartic protease family signature 294 305 IPR001461 GO:0004190|GO:0006508
Phco7g01745 443 PRINTS Pepsin (A1) aspartic protease family signature 404 419 IPR001461 GO:0004190|GO:0006508
Phco7g01745 443 Pfam Xylanase inhibitor C-terminal 290 428 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01745 Phco-Chr7 17632454 17637414 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01745 7 17632454 17637414 Phco7g01745 7 17632454 17637414 ECH