Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01720 ATGAATTTCCCTTATCTTACTAGCATCTCCGAACGTGTCGTTGCTCCTCTATATGCCACAGTTCCCGCCACAATTATCAGGGGCAATAAGGCGGAGAGTTTTGCAATTGAAGGGCGTAATCTGAGATTCTCATTCACGACGAGGCAAACGCAGGATGTACCGGTTCTTAGGGATTGTTCGATTCGCATTCCTTGCGGGCAGTTTTGGATGCTTCTTGGACCCAATGGGTGTGGAAAATCTACCCTCTTGAAGATTTTGGCTGGTCTCTTGACCCCAACTTCAGGAACAGTGAATGTGAATGGACCTAAAAGTTTCGTTTTCCAAAATCCAGATCATCAGGTGGTGCTGCCTACTGTGGATGCTGATGTTGCATTTGGTCTTGGTAAGATTGATTTGACTCACGATGAAGTCAGATCTAGGGTGTCGAGAGCTTTGCATGCTGTTGGCCTGTCTGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCCATCGCTGGTGCTCTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACATTCTTAGATGAAAGTGACCAGGTCGGGGTTATCAAAGCTGTCAGGAACTCTGTGGATACCTCTCCAGAAGTTACGGCATTATGGGTCACCCATCGTTTGGAAGAACTAGAGTATGCAGATGGTGCCATCTACATGGAGGATGGGAAAGTTGTCATGCAAGGAGATGCTGCTAGCATTAGGAGTTTCATTGAAGCCAGACAATCTGCTTATATAAACCAGATTAATTCTTAA 798 0.4586 MNFPYLTSISERVVAPLYATVPATIIRGNKAESFAIEGRNLRFSFTTRQTQDVPVLRDCSIRIPCGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVNVNGPKSFVFQNPDHQVVLPTVDADVAFGLGKIDLTHDEVRSRVSRALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQVGVIKAVRNSVDTSPEVTALWVTHRLEELEYADGAIYMEDGKVVMQGDAASIRSFIEARQSAYINQINS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01720 265 CDD ABC_cobalt_CbiO_domain1 37 238 IPR015856 GO:0005524|GO:0016020|GO:0055085
Phco7g01720 265 Gene3D - 31 264 IPR027417 -
Phco7g01720 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 253 IPR027417 -
Phco7g01720 265 ProSitePatterns ABC transporters family signature. 161 175 IPR017871 GO:0005524|GO:0016887
Phco7g01720 265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 261 IPR003439 GO:0005524
Phco7g01720 265 Pfam ABC transporter 56 188 IPR003439 GO:0005524
Phco7g01720 265 FunFam ABC transporter I family member 10 32 262 - -
Phco7g01720 265 SMART AAA_5 65 238 IPR003593 GO:0016887
Phco7g01720 265 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 36 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01720 Phco-Chr7 17303204 17307908 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01720 7 17303204 17307908 Phco7g01720 7 17303204 17307908 ECH