Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01702 ATGGGTGCTTCTCCTCATTCCGTTGAAGCTCGACACCGTTTACCTGCATCCATTGAAGATTTATACAAACGAAGATTGCCAAGAAGCAAAGCAAAAGATGCAGAGAAGCCTTTCCACTTATCAGTCCAAGATAGGAGCTCAAGATGCAAGTTCTCTTTCTTAAAACTCATCCTATTGATAACCATATGTGGCACTTTTGTAACACTGCTGTATTCTCCAGAGGTTTACAATACCAACCATTTATCAACCTCAGGCTCTCGGTGGATATGGGGTGGTGCAGATCCTCGTTACATATCCAATGTAGACACTGACTGGGATGACATACAGAAAATTACGGATATGCTGACAGGGCTAGACGAACTTCAAGGAATTGGGCTTGTAAATTTCAACAAGACTGAACAAGTTCACTGGGAGCATCTTATTCCTGATACAACACATGTTGTTCTGCCTTTGGACCATGCTGCAAGAAATGTGACATGGGAATCCTTGTACCCGGAATGGATTGATGAGGAAGAGGAAACTGAAGTTCCTGTTTGTCCTTCTCTGCCTACTCTTAGGTCCCCTGGCATAAGACTTAACCTCATTGCCGTGAAGCTTCCTTGTAGGAATGGAGGGAATTGGTCCAGAGATGTTGCTCGTTTGCATCTTCAGCTTGCAGCTGCTGCCCTTGCAACCTCTTTCAAAGGCAACTACCCTGTTTATGTGCTCTTCATTACCAACTGTTTTCCAATACCAAATTTGTTTACATGCAAAGAACTAGTCGGACGTGAAGGGAATGTGTGGTTATACAAACCAAACTTGAGTGTCTTGAGAGAAAAAGTCCAGCTTCCAGTAGGGTCTTGTGAACTTGCACTTCCAATGAGAGGCAAAGAGTTGGCTTACAATGGGAATGCTCCTAGAGAAGCCTATGCAACAATTTTGCACTCAGCTCATGTTTACGTTTGTGGGGCTATAGCTGCTGCACAAAGCATCCGCATGTCTGGATCAACTCGAGACTTTGTAATACTTGTTGATGAGACGATCAGTGGCTATCACAGAAGTGGTTTGGAAGCAGCAGGATGGAAGGTTAGAACAATACAAAGGATCAGAAACCCCAAAGCTGAAAAAGATGCTTACAATGAATGGAACTACAGCAAGTTCAGGCTATGGCAGTTAACAGATTATGACAAGATAATATTCATTGATGCAGATTTGCTCATACTAAGAAATATAGATTTCCTATTCGGAATGCCAGAAATCACCGCCACTGGAAACAATGCCACTCTCTTCAACTCCGGTGTCATGGTGGTTGAGCCATCAAATTGCACATTCCAGCTCCTGATGAATCACATAAACGAGATTGAGTCCTACAATGGAGGGGACCAAGGATATTTGAATGAAATATTTACATGGTGGCACAGGATACCAAGACACATGAACTTCTTGAAGCATTTTTGGATTGGTGATGAGGAAGAGAAGAAACAAATGAAAACTTTGTTGTTTGGCGCAGAGCCTCCAATTTTGTACGTCCTGCACTATCTAGGTGTGAAGCCATGGTTATGCTTCCGGGACTATGATTGCAACTGGAATGCTGATATCTTTCATGAATTTGCAAGTGATGTTGCTCATGCAAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGCTTTTGCAGCAGTTTTGTCTCCTGAAATCAAAGCAGAAGGCACAGTTGGAGTGGGATCGTAGGCAGGCTGAAATAGCAAATTACACGGACGGGCATTGGCGAATAAAAGTTAAAGATAGACGCTTGAAGAAATGTATAGATAATTTATGCAACTGGAAAACCATGTTGCGGCACTGGGGAGAGACAAATTGGACAGATGATGAGTTTTATACTCCAACACCACCTACCATTACCACAACATCTCTTTCGGCTTTATGA 1902 0.429 MGASPHSVEARHRLPASIEDLYKRRLPRSKAKDAEKPFHLSVQDRSSRCKFSFLKLILLITICGTFVTLLYSPEVYNTNHLSTSGSRWIWGGADPRYISNVDTDWDDIQKITDMLTGLDELQGIGLVNFNKTEQVHWEHLIPDTTHVVLPLDHAARNVTWESLYPEWIDEEEETEVPVCPSLPTLRSPGIRLNLIAVKLPCRNGGNWSRDVARLHLQLAAAALATSFKGNYPVYVLFITNCFPIPNLFTCKELVGREGNVWLYKPNLSVLREKVQLPVGSCELALPMRGKELAYNGNAPREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDFVILVDETISGYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMVVEPSNCTFQLLMNHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTLLFGAEPPILYVLHYLGVKPWLCFRDYDCNWNADIFHEFASDVAHAKWWKVHDAMPELLQQFCLLKSKQKAQLEWDRRQAEIANYTDGHWRIKVKDRRLKKCIDNLCNWKTMLRHWGETNWTDDEFYTPTPPTITTTSLSAL 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01702 633 FunFam Hexosyltransferase 298 550 - -
Phco7g01702 633 PANTHER GLYCOGENIN SUBFAMILY MEMBER 207 593 - -
Phco7g01702 633 Pfam Glycosyl transferase family 8 307 513 IPR002495 GO:0016757
Phco7g01702 633 SUPERFAMILY Nucleotide-diphospho-sugar transferases 300 546 IPR029044 -
Phco7g01702 633 CDD GT8_Glycogenin 301 546 - -
Phco7g01702 633 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 299 548 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01702 Phco-Chr7 16960427 16965869 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01702 7 16960427 16965869 Phco7g01702 7 16960427 16965869 ECH
Phco7g01702 7 16960427 16965869 Phco4g03072 4 51681929 51682702 ECH
Phco4g03072 4 51681929 51682702 Phco7g01702 7 16960427 16965869 PCT