Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01681 ATGAGATCCCTTCTCCAAACGAAGCATTTGTTGGCGGTTAGGGTTCGGAGGCATCAGTTGTGGCACGACTCTCGAGACGTCAAGGTTTCGGTGTGGTGGGATTTCGAGAACTGCCAGGTGCCGGCGGGGGTTGACGCTTTGGATGTGGCGCCGGCGATCACGAAGGCTGTGAGAGCGAGTGGTATTAAGGGCCCTCTCCGAATCAATGCTTTCGGTGATGTTTTGCAGCTCTCTAAACCCAACCAGCAAGCACTTTCTCACACTGGCATTCATTTCACCCACATTCCAGGTGGAAAGAACAGTGCCGATAGATTTCTTCTCATGAATCTTATGGACTGGGTTTCTCAAAATCCTCCGCCTGCCCATCTCTTTTTGATATCTGCTGATGGAGACTTTGCTGGAATGTTACATCGGTTAAGAATACATAATTACAATATATTACTTGCTAGCACAAGGAATGCTCCTGGTGTCCTCTGCAGTGCAGCAACTATAATATGGCAATGGTCTTCATTAGTAAAAGGGGAACATCTTTCTGGAAAACATTTAAACCATCCTCCTGATGCTTTGTTTGGTTCTTGGTATGGAAATTACAAGGTGATTCCTGAAAAACCATTCTCAGATGTTGAGAAGTCTGCATCTTCACAAAAAGTGGACATATACAAACCTTCCTTAGATTTGCACACTGTTCCAAAAAAAGTTGTAATACAGGTTTGCCGTATATTAAGGTCACATCCAAAAGGAATCTCAATTAGAGATCTTGGTATAGAGTTGAAGAAACGTAAAGTGGATTTTGGTAAAAAGTTTTATGGATATGGAACATTTTCTCGCTTTCTAACATCAACACTGCATGTAGAGCTTGAGCCTTTAGGCTTTGGTAATTTTCATGTATGTCTGATCCCCTCAGAATCCCCCAAACCTTTTGAGGGAAAAGCTGTGGAGTCAGTAGCATCTTGTATTAAGATCGATAAGAAGGGATCTGTAGCAACTCCAAAGCTAAACGGTGAGGATAAAAACAATGTTAGAGAAGCAAATTGGATACCCTTAACTGCATCATCTCATGAAAGGAGTATGGATGAGGATTCAAAATCATCACTTTCATTGGTTGATAGACATGTGTCTCAGCCCCCAGATGCGTTGCAGAAATTTTCATCGTGTAGAGAGGTTGTTGATATGACTACTGAACAACTGTCAGACATTCAACCACAATACAAAGACAACCAACTTTCCAAAACTAAGCCAGATTCCTTAAAATTGAGTTCGAATTCTAAAACATTATGTGATTGTGACATTGTTGGCTCTGAGGATGCAAGTTATAGAATTCAGGAAAAATACACGACTTCAAGGAATCACTTTGCTGGAAATGATCAGACAGCAAAAGAAGACATTGGTACTGCAACTTATGAATATGCTAATTATAGAGCAATGAACAAATATGAGAACTCAAATAGAAAAGAGGTTGATGAAGTTTGTCACAGCCCATATTCTATACAAGCTGATGACTCTCTGCTTGATAAAATACCTAGTGGAAGTGATAAAACTAATAGGAATGGCCCAACATTCTTTGTCTGGATCAGAAACTGGTGGCAATTTTGGAAAGGCAATGCAGAATCTGGTGTTTCAGCTGATTATCATAACAAGGTGGTTAGTCATTTCGAGGATTCTAACCCATCTGAACTAGTAGAGCAAACAGCTCAGATTGTGAGCGATTTTACAGAACCCAAGTTATCAGAGCTGGACCAGCCTGAGTTGTTTTCTAGCGGTGCCTTTTGGGATGACATAGAAACTTTTATTTTCACGCTCAAAGGATCATTAATTGTTTCCCAGTCGAAAAACAGGGAGGATATGGCGTATAAATTGCTAAAGGATGGACCCCCAGTTTTAAGATCTCTCACTGAAGAAGATATTCTTCAATTGGTGGAGTTGTTAATATCAGAGAAAAAGTGGTTGGAGGAAATCCCGTCCCAAAAATTTCCTTTTAGGGTAACTAAACCAGTTCAGGGGAACTCATTGATGGGCCAATCTCAGGGTGCAAATGGTTTGAGATCCCTCTTTCTGAGCAGATCATCACAATCCATGTTGCAAAAATCATCTGAACATGATATGGAAAAAGACGATAAGACTATTCCTAAATCTGGAGTTTCTGCAACTGCCACCGAGACGAAATATAAGGGGAGGTCTGGAAAGGATATATTAGAAGATTGGTAA 2205 0.4073 MRSLLQTKHLLAVRVRRHQLWHDSRDVKVSVWWDFENCQVPAGVDALDVAPAITKAVRASGIKGPLRINAFGDVLQLSKPNQQALSHTGIHFTHIPGGKNSADRFLLMNLMDWVSQNPPPAHLFLISADGDFAGMLHRLRIHNYNILLASTRNAPGVLCSAATIIWQWSSLVKGEHLSGKHLNHPPDALFGSWYGNYKVIPEKPFSDVEKSASSQKVDIYKPSLDLHTVPKKVVIQVCRILRSHPKGISIRDLGIELKKRKVDFGKKFYGYGTFSRFLTSTLHVELEPLGFGNFHVCLIPSESPKPFEGKAVESVASCIKIDKKGSVATPKLNGEDKNNVREANWIPLTASSHERSMDEDSKSSLSLVDRHVSQPPDALQKFSSCREVVDMTTEQLSDIQPQYKDNQLSKTKPDSLKLSSNSKTLCDCDIVGSEDASYRIQEKYTTSRNHFAGNDQTAKEDIGTATYEYANYRAMNKYENSNRKEVDEVCHSPYSIQADDSLLDKIPSGSDKTNRNGPTFFVWIRNWWQFWKGNAESGVSADYHNKVVSHFEDSNPSELVEQTAQIVSDFTEPKLSELDQPELFSSGAFWDDIETFIFTLKGSLIVSQSKNREDMAYKLLKDGPPVLRSLTEEDILQLVELLISEKKWLEEIPSQKFPFRVTKPVQGNSLMGQSQGANGLRSLFLSRSSQSMLQKSSEHDMEKDDKTIPKSGVSATATETKYKGRSGKDILEDW 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01681 734 PANTHER LIMKAIN B LKAP 17 703 IPR024768 GO:0005777|GO:0010468
Phco7g01681 734 MobiDBLite consensus disorder prediction 691 734 - -
Phco7g01681 734 CDD PIN_limkain_b1_N_like 28 150 - -
Phco7g01681 734 ProSiteProfiles OST-type HTH domain profile. 229 300 IPR025605 -
Phco7g01681 734 Pfam OST-HTH/LOTUS domain 235 293 IPR025605 -
Phco7g01681 734 Pfam NYN domain 28 162 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01681 Phco-Chr7 16617059 16620335 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01681 7 16617059 16620335 Phco7g01681 7 16617059 16620335 ECH