Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01648 ATGTACATGCTTGTAATGGTTCTTTTGGACTGGAGTCAAAAACAGAAAAATGCTCCTTGGTTATCAGTGCCACAGTTTGGGGACTGGGATCAGAAGGGACAAGTGCCAGACTACTCACTGGATTTCTCTAAAATTCGGGAAATGAGGAAGCAAAACAAGACAAATATTTCAAGGGCAAGTCTGGGTAATGAAGAGGAACTGATGGCTTCTTCTACCACTAACAATACAAACACTGTCCACAGTGATGAGCACCAGCACCCTCACTACCACCAAACAAGCTCTCCAACTGTAAGATCCCTCCCCAGCTTTATCATTCCTTGTGTTATTAGCTATAACTTTTTTACGGCAACACGCAATTCTAGTCGCTGCACATGGATGAATGTTTGGGGCAGTTGCATTCATTTCATTGACGAGGAGGAGCTTCCTGAGCTACTTCAACTGTTGCGTAAAAGCTTGATGCTGCTGGGAATCTAG 474 0.4388 MYMLVMVLLDWSQKQKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMASSTTNNTNTVHSDEHQHPHYHQTSSPTVRSLPSFIIPCVISYNFFTATRNSSRCTWMNVWGSCIHFIDEEELPELLQLLRKSLMLLGI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01648 157 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN 13 105 - -
Phco7g01648 157 MobiDBLite consensus disorder prediction 69 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01648 Phco-Chr7 15949464 15951296 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01648 7 15949464 15951296 Phco7g01648 7 15949464 15951296 ECH