Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01647 ATGCAGAAAATCAAAGATATCGAAGATGAGATGGCAAGGACCCAAAAAAACAAGGCAACTGCTCATCATTTGGGCTTGCTGAAGGCTAAACTTGCAAAGCTGCGGAGGGAACTCCTCACTCCTTCATCAAAAGGAGGTGGCGGTGCTGGTGAAGGTTTTGATGTTACTAAAAGTGGGGATTCAAGAGTTGGTCTTGTGGGCTTCCCTTCGGTTGGAAAATCTACTTTACTTAATAAGTTGACTGGGACATTTTCTGAGGTTGCTTCCTATGAGTTTACTACCTTAACTTGCATCCCAGGAGTGATAACATATCGCGGAGCTAAACTCCAGTTGTTGGATCTCCCTGGAATTATTGAGGGTGCTAAGGATGGAAAGGGTAGAGGAAGGCAGGTTATTAGTACTGCAAGGACATGCAATTGCATTTTGATTGTCCTAGATGCAATAAAGCCAATAACTCATAAGCGTCTTATAGAAAAAGAGCTGGAGGGATTTGGTATAAGGTTGAACAAAGAGCCACCAAATCTGACTTTTAGGAAGAAAGATAAAGGTGGAATCAATCTCACCTCAACTGCCACCACAACACATCTGGATCTTGATACTGTGAAGGCTATATGTAGTGAGTACAGAATTCACAATGCTGATATTACTCTCCGGTATGATGCCACTGCTGATGACCTTATAGATGTCATCGAGGGCAGTAGAGTATATATGCCTTGTATCTATGCTGTGAACAAGATTGATCAGATTACACTTGAAGAACTGGAGATCTTGGATAAGCTACCTCATTACTGCCCAGTCAGTGCACACCTGGAGTGGAACCTTGATGGTCTTCTGGACAAAATCTGGGAATATCTCAGCTTAACTCGTATTTATACTAAACCTAAAGGGATGAATCCTGACTATGAAGACCCTGTAATATTATCCTCAAAGAAGAGGACAGTTGAAGACTTCTGTAATCGTATTCACAAGGACATGCTTAAACAGTTTAAGTATGCTTTGGTCTGGGGTTCAAGTGCGAAACACAAGCCTCAAAGAGTCGGCAAGGAGCATGAACTCGAAGATGAAGATGTGGTTCAGATTATCAAGAAAGTTTAA 1095 0.4183 MQKIKDIEDEMARTQKNKATAHHLGLLKAKLAKLRRELLTPSSKGGGGAGEGFDVTKSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKLQLLDLPGIIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLTFRKKDKGGINLTSTATTTHLDLDTVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVYMPCIYAVNKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLDKIWEYLSLTRIYTKPKGMNPDYEDPVILSSKKRTVEDFCNRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIIKKV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01647 364 CDD TGS_DRG1 284 363 - -
Phco7g01647 364 CDD DRG 61 293 IPR045001 GO:0003924|GO:0005525
Phco7g01647 364 PRINTS GTP1/OBG GTP-binding protein family signature 128 146 IPR006073 GO:0005525
Phco7g01647 364 PRINTS GTP1/OBG GTP-binding protein family signature 111 126 IPR006073 GO:0005525
Phco7g01647 364 PRINTS GTP1/OBG GTP-binding protein family signature 63 83 IPR006073 GO:0005525
Phco7g01647 364 PRINTS GTP1/OBG GTP-binding protein family signature 84 102 IPR006073 GO:0005525
Phco7g01647 364 NCBIfam small GTP-binding protein domain 60 212 IPR005225 GO:0005525
Phco7g01647 364 Gene3D - 1 82 - -
Phco7g01647 364 Gene3D - 125 235 - -
Phco7g01647 364 ProSitePatterns GTP1/OBG family signature. 113 126 IPR006074 GO:0005525
Phco7g01647 364 PANTHER DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2 1 363 IPR045001 GO:0003924|GO:0005525
Phco7g01647 364 Pfam 50S ribosome-binding GTPase 62 154 IPR006073 GO:0005525
Phco7g01647 364 ProSiteProfiles TGS domain profile. 286 362 IPR004095 -
Phco7g01647 364 Gene3D - 279 364 IPR012675 -
Phco7g01647 364 Pfam TGS domain 289 362 IPR004095 -
Phco7g01647 364 SUPERFAMILY TGS-like 282 362 IPR012676 -
Phco7g01647 364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 305 IPR027417 -
Phco7g01647 364 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 61 286 IPR031167 GO:0005525
Phco7g01647 364 FunFam Putative GTP-binding protein 1 49 187 - -
Phco7g01647 364 FunFam Developmentally-regulated GTP-binding protein 1 279 363 - -
Phco7g01647 364 Pfam C-terminal region of MMR_HSR1 domain 182 287 IPR031662 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01647 Phco-Chr7 15926954 15935290 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01647 7 15926954 15935290 Phco7g01647 7 15926954 15935290 ECH