Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01528 ATGAATGCTTATTTGATCGCAGCCATTTCTCTGTTGGGCGTGTTTCTGTCATCATCGATCGTGTTGGGGTTCGAGGAGGAAGAAGTGTATGCCAAAGAGATTCTGGACTTAGCACAGAAGGAGAAGGAATGGTTGGTTTCGTTGAGAAGGAAAATCCACGAACACCCAGAACTGGCTTTCCAAGAACACAACACCAGTTCTCTTATACGCGCACAACTTCACAAACTTGGCATACCATACACATACCCAGTTGCCAAAACCGGCGTCGTTGCACAAATTGGCTCGGGCTCTCGCCCCATCATTGCTATTCGTGCTGATATGGATGCACTCCCCTTGCACGAGCTTGTTGAGTGGGAACACAAGAGCAAAATTGACGGCAGAATGCATGCGTGTGGACATGATGCTCACACCACCATGCTACTTGGGGCTGCAAAGTTGCTCAGCCAGCGCCAAGATAAGCTTCAGGGAACTGTAAGACTTATTTTCCAACCTGTTGAGGAAGGAGCCAGGGGTGCCTCTCAAATGATAAAGGAAGGAGTGCTTCAAGATGCAGAAGCAATTTTTTCATTACATATTGATGCTACAACACCTACTGGAGCCATAGCATCCATTCCAGGTGCATTTACTGCAGCTGGATGCGTGTTTGAGGCAAGGATGGTAGGAGTAGGTGGTCATGCTGCAACACCCCACACGAATGTAGATCCAGTGCTGGCCACATCATTTGCAATTTTGGCACTGCAACAGCTCGTTTCAAGAGAAACTGATCCTCTTCAAAGTCAAGTGCTATCAGTTAGTTTTGTCAAAGGGGGAACTGCATTAAACGTGATTCCCTCGTATGTAAAATTTGGAGGCACACTTAGGAGCCAGACAACTGAAGGCATGTACCATTTCAGACAGCGATTAAAGGAGGTTATTGAAGGACAGGCAGTTGTGCACAGATGCAATGCTTATGTTGATTTCAAAGAAGAGTACTTCACCCCATATCCTGCTGTTGTTAACGACAATGATCTGCATCTGCATGTGGTAAGAGTTGGGAAACTTCTGCTTGGTCCAGACAATGTGCATGAAGCCAAGAAGGTGTTGGCAGGTGAGGAGGACTTTGCATATTTTCAACAAGTGATTCCCGGAGCATTGTTTTCCGTTGGAATCAGAAATGATAAAGTGGGAGCAATTCACTCCCCACATTCCCCTTTCTTCTTTCTGGATGAGGAGGTTCTGCCAATAGGGACAGCTCTGCACACTGCTCTTGCTGAGTTGTATTTAAAAGAGCATAACCATACTGTTCATTGA 1290 0.4612 MNAYLIAAISLLGVFLSSSIVLGFEEEEVYAKEILDLAQKEKEWLVSLRRKIHEHPELAFQEHNTSSLIRAQLHKLGIPYTYPVAKTGVVAQIGSGSRPIIAIRADMDALPLHELVEWEHKSKIDGRMHACGHDAHTTMLLGAAKLLSQRQDKLQGTVRLIFQPVEEGARGASQMIKEGVLQDAEAIFSLHIDATTPTGAIASIPGAFTAAGCVFEARMVGVGGHAATPHTNVDPVLATSFAILALQQLVSRETDPLQSQVLSVSFVKGGTALNVIPSYVKFGGTLRSQTTEGMYHFRQRLKEVIEGQAVVHRCNAYVDFKEEYFTPYPAVVNDNDLHLHVVRVGKLLLGPDNVHEAKKVLAGEEDFAYFQQVIPGALFSVGIRNDKVGAIHSPHSPFFFLDEEVLPIGTALHTALAELYLKEHNHTVH 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01528 429 PANTHER PEPTIDASE M20 FAMILY MEMBER 26 428 IPR017439 GO:0016787
Phco7g01528 429 Pfam Peptidase family M20/M25/M40 102 417 IPR002933 GO:0016787
Phco7g01528 429 CDD M20_IAA_Hyd 45 421 IPR044757 GO:0009850|GO:0016787
Phco7g01528 429 Gene3D - 210 328 - -
Phco7g01528 429 NCBIfam amidohydrolase 45 409 IPR017439 GO:0016787
Phco7g01528 429 PIRSF Amidohydrol_AmhX 30 425 IPR017439 GO:0016787
Phco7g01528 429 Gene3D Zn peptidases 45 406 - -
Phco7g01528 429 FunFam N-acetyldiaminopimelate deacetylase 210 328 - -
Phco7g01528 429 Pfam Peptidase dimerisation domain 216 308 IPR011650 -
Phco7g01528 429 SUPERFAMILY Bacterial exopeptidase dimerisation domain 210 329 IPR036264 -
Phco7g01528 429 SUPERFAMILY Zn-dependent exopeptidases 32 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01528 Phco-Chr7 14501026 14505597 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01528 7 14501026 14505597 Phco7g01528 7 14501026 14505597 ECH