Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01523 ATGTCTCCGGGACCCGTTGTTGATGCCGCCGCCGATACCGGAGCCGAGCCACAAGTGCTCTCCGTCGATGATGCAGCCCTGAAGAAGAAACCTCACCCCCAGGAAGATGATGCTCCCATCGTAGAGGACGTCAAGGACGATGAAAAAGACGAAACCGAAGACGAGGATGAGGACGAGGACGATGACAAAGATGACGCCCAAGGTGGTACTGAGGGTTCGAAGCAGAGCAGAAGTGAGAAGAAGAGCCGAAAAGCAATGTTGAAGCTGGGACTGAAACCTGTTACTGGTGTTAGTAGGGTCACAATCAAGAGGACAAAGAATGTTCTTTTTTTCATCTCAAAACCCGACGTCTTCAAGAGTCCAAATTCTGAGACCTATGTCATATTTGGGGAGGCAAAAATAGAGGACTTGAGCTCTCAGTTGCAGACACAGGCTGCTCAACAGTTCAGGATGCCAGATGTGGGATCTGTGCTGGCAAAACAAGATCAAGATGCTGCAGCTGCAGTGGCACAGCCTGAAGAAGAGGAGGAGGTCGATGAAACTGGTGTCGAGCCGCATGACATTGATTTGGTGATGACCCAGGCAGGAGTTTCTAGAAGCAAGGCTGTCAAGGCCCTCAAGACTCACGACGGGGACATTGTTGGTGCTATCATGGAGCTCACTACTTAG 669 0.5082 MSPGPVVDAAADTGAEPQVLSVDDAALKKKPHPQEDDAPIVEDVKDDEKDETEDEDEDEDDDKDDAQGGTEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNVLFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDVGSVLAKQDQDAAAAVAQPEEEEEVDETGVEPHDIDLVMTQAGVSRSKAVKALKTHDGDIVGAIMELTT 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01523 222 FunFam Putative nascent polypeptide-associated complex subunit alpha 183 220 - -
Phco7g01523 222 ProSiteProfiles NAC A/B domain profile. 76 141 IPR002715 -
Phco7g01523 222 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 24 221 IPR016641 GO:0005854
Phco7g01523 222 Pfam HYPK UBA domain 182 221 IPR044034 -
Phco7g01523 222 CDD UBA_NAC_euk 185 221 - -
Phco7g01523 222 MobiDBLite consensus disorder prediction 1 85 - -
Phco7g01523 222 Gene3D - 85 138 IPR038187 -
Phco7g01523 222 MobiDBLite consensus disorder prediction 23 39 - -
Phco7g01523 222 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 86 138 - -
Phco7g01523 222 MobiDBLite consensus disorder prediction 40 66 - -
Phco7g01523 222 CDD NAC_NACA 90 137 - -
Phco7g01523 222 MobiDBLite consensus disorder prediction 67 85 - -
Phco7g01523 222 Gene3D - 183 220 - -
Phco7g01523 222 SMART NAC_2 79 135 IPR002715 -
Phco7g01523 222 Pfam NAC domain 79 134 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01523 Phco-Chr7 14431190 14432604 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01523 7 14431190 14432604 Phco7g01523 7 14431190 14432604 ECH