Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01520 ATGGGTTCAACAGGTGAGACTCAGATCACTCCAAGCCATGTGTCTGATGAAGAGGCAAACCTGTTTGCCATGCAACTGGCGAGTGCCTCTGTTCTCCCAATGGTTCTGAAATCAGCGATTGAACTTGATCTGTTGGAAATCATAGCCAAGGCTGGCCCTGGAGTTCATCTTTCTCCCTCCCAGATTGCTTCTCAGCTCCCAACACACAACCCTGAGGCACCCGTCATGTTGGACCGCATCTTGCGCCTATTGGCTTCCTACAATATCCTCTCTTTCACTCTCCGCACTCTCCCTGATGGCAAGGTTGAGAGGCTCTATGGTCTTGCTCCTGTTGCCAAGTACTTGGTCAAGAACGAGGATGGCGTCTCCATTGCTGCTCTCAACCTCATGAACCAGGACAAAGTCCTCATGGAAAGCTGGTACTACTTGAAAGATGCAGTTCTTGAAGGGGGCATTCCATTTAACAAGGCATATGGAATGACAGCCTTTGAGTACCATGGAACAGATCCAAGGTTTAACAAGGTTTTCAACAAGGGTATGGCTGATCACTCTACCATCACAATGAAGAAAATTCTTGAGACCTACACAGGCTTTGAGGGTCTTAAATCTCTGGTAGATGTTGGTGGTGGAACTGGAGCTATAATAAACATGATAGTCTCAAAGTATCCGAATATTAAGGGTATTAATTTTGATTTACCCCATGTCATCGAAGACGCCCCATCTTATCGAGGAGTGGAGCATGTAGGTGGAGACATGTTTGTGAGTGTTCCAAAAGCTGACGCTGTTTTTATGAAGTGGATTTGCCACGATTGGAGTGATGAACACTGTTTGAAATTTCTGAAGAACTGCTACGATGCATTACCAGAAAATGGGAAGGTGATTGTGGCAGAATGCATTCTTCCAGTGGCTCCAGATTCTAGCTTGGCCACAAAGGGTGTGGTTCACATCGATGTGATAATGTTGGCTCATAATCCAGGTGGGAAAGAGAGAACAGAGAAAGAGTTTGAGGCTCTGGCCAAAGGATCTGGATTCCAAGGTTTCCGAGTCCTGTGCTCTGCTTTCAATACCTACATCATTGAGTTTCTCAAGAAGGTTTAA 1098 0.4581 MGSTGETQITPSHVSDEEANLFAMQLASASVLPMVLKSAIELDLLEIIAKAGPGVHLSPSQIASQLPTHNPEAPVMLDRILRLLASYNILSFTLRTLPDGKVERLYGLAPVAKYLVKNEDGVSIAALNLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMADHSTITMKKILETYTGFEGLKSLVDVGGGTGAIINMIVSKYPNIKGINFDLPHVIEDAPSYRGVEHVGGDMFVSVPKADAVFMKWICHDWSDEHCLKFLKNCYDALPENGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKGSGFQGFRVLCSAFNTYIIEFLKKV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01520 365 PANTHER O-METHYLTRANSFERASE 23 344 IPR016461 GO:0008168
Phco7g01520 365 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Phco7g01520 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 361 IPR029063 -
Phco7g01520 365 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
Phco7g01520 365 CDD AdoMet_MTases 204 295 - -
Phco7g01520 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 363 IPR016461 GO:0008168
Phco7g01520 365 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Phco7g01520 365 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Phco7g01520 365 Gene3D Vaccinia Virus protein VP39 116 363 IPR029063 -
Phco7g01520 365 FunFam Caffeic acid O-methyltransferase 116 363 - -
Phco7g01520 365 SUPERFAMILY "Winged helix" DNA-binding domain 15 119 IPR036390 -
Phco7g01520 365 Gene3D - 1 115 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01520 Phco-Chr7 14401275 14402674 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01520 7 14401275 14402674 Phco7g01520 7 14401275 14402674 ECH