Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01497 ATGTCACAGCCAAGGCCAAACAAGATGATGAGTCCAAACCTTGCCAAACAAGTTGGTGACACAACCTATACTAAGATCTTTGTTGGAGGATTGGCCTGGGAGACCAAGAGAGACTCTCTGAAACGCTATTTTGATCAGTTTGGGGAGATCTTAGAGGCGGTTGTCATCACTGATAGAATCACTGGAAGATCAAAAGGATATGGCTTTGTGACCTTCAAGGACCCAAATTCTGCAGCAAGGGCTTGTCTAAATCCCTATCCTGTGATTGATGGAAGGAGAGCTAATTGTAATCTTGCAGCCCTTGGTGCCCAGAAATATGATCCATCTACAACAGGAAGACAAAAATTCAGTAGCCCTTCATGGAATATGGCACCAGTCCCATTGCAAGGCACCTCCACCTTTTATAATCAACACTTACCTCACTACCCATTTCCGTATCCAGCTTACAGGTATCCTGGTTTTACTCATCCACAAGACTTGTATGAAATGAACTACAATAATGCATATGGTGGACAGCAGTTTTCCTTCCGCTGGTATCCAACGTATTGCCAGCCCATTTATGGACTTGGTAGACAGATTATTCCAACAACCTATGTTAAAAAGGTCATCCCTGACATGTCATCTCAGGAGCTCGCAGTTGTTGGCTTTTCAGAACCTACTTCAGCTTCTGCCTCAACTCCCAGCACTGGATTAGATACTGGAGCAGTACCTGCCACAGAAGTGCTAGAATCTCCTCAAGAACAGACATCTTCAACTCCTTAA 762 0.4423 MSQPRPNKMMSPNLAKQVGDTTYTKIFVGGLAWETKRDSLKRYFDQFGEILEAVVITDRITGRSKGYGFVTFKDPNSAARACLNPYPVIDGRRANCNLAALGAQKYDPSTTGRQKFSSPSWNMAPVPLQGTSTFYNQHLPHYPFPYPAYRYPGFTHPQDLYEMNYNNAYGGQQFSFRWYPTYCQPIYGLGRQIIPTTYVKKVIPDMSSQELAVVGFSEPTSASASTPSTGLDTGAVPATEVLESPQEQTSSTP 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01497 253 SUPERFAMILY RNA-binding domain, RBD 8 99 IPR035979 GO:0003676
Phco7g01497 253 MobiDBLite consensus disorder prediction 219 253 - -
Phco7g01497 253 PANTHER BOULE-RELATED 7 216 - -
Phco7g01497 253 Gene3D - 1 115 IPR012677 -
Phco7g01497 253 SMART rrm1_1 25 97 IPR000504 GO:0003723
Phco7g01497 253 CDD RRM_RBM24_RBM38_like 24 99 - -
Phco7g01497 253 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 24 101 IPR000504 GO:0003723
Phco7g01497 253 MobiDBLite consensus disorder prediction 219 233 - -
Phco7g01497 253 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 26 81 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01497 Phco-Chr7 14090258 14091647 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01497 7 14090258 14091647 Phco7g01497 7 14090258 14091647 ECH