Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01429 ATGGGGAAGAAAGGAGGCAGCTGGTTCTCCTCCGTCAAAAAAGTTTTCAAATCCTCTTCTAAGGACTCGCCGGTGCCGGAGAAGAAGAAAGACAACAACAAGGAAGAGCAATGGCAGCATGAGGCGCCAGAGGAGGTGTCCTTGGAGCATTTTCCTGCAGAGAGTTCTCCTGATATTACATATGAAGGGAGTGCCACGTCAACACCAGTGACTGAAGATAGAAGCCATGCTATTGCCTTTGCAGCAGCAACTGCTGCCGCTGCCGAAGCCGCAGTAGCAGCAGCTCAAGCAGCCGCTAGAGTTGTGAGATTGGCAGGTTATGGACGCCAATCCACGGAGGAAAAAGCTGCAATACTCATTCAATCGTACTACAGAGGTTACCTAGCTCGACGTGCATTGCGGGCTTTGAAGGGATTGGTGAGGCTGCAAGCGCTTGTGAGGGGACACAATGTGAGAAAGCAAGCGCAGATGACCATGCGATGCATGCATGCATTAGTTCGAGTACAGGCAAGAGTAAGAGCTCGAAGACTCCAGTTGACTCAAGAGAAGTTTCAGAGAAGAGTTGAGGAACAGGTCCAAAGAGAACTAGAGGAACAAGAACAACCTAAGCTGCTTTTGAGCCCCATCAAAATGTTAGACATGGATACTTGGGACAGTAGGCGCCAAAGTAGCCAACAGATTAAGGAAAATGATTTGAGGAAACATGAAGCTGCAATGAAGAGGGAGAGAGCTCTTGCTTACGCTTTCAACTGCCAGCAGCAGAAGCAATACATGCACATAGACCCAAATGGTGATGATATTGGAAGCTATACCAATGAGCGTGAAAGAGCCCAAATGGATTGGAACTGGTTGGAACGCTGGATGTTATCACAATCACACAATTCAAGGCACTTTGGGCCACGGGAGAACCTTTATAGAACTCTTGCTACTACAGCTTCCACCACTGATGACATGTCTGAAGAAAAAACAGTTGAAATGGACATGGCTGCAACTCTGGACTCAGCTCATGCTAACATGGGCCTCATCCACCGAGAATCTTTTGATACAAGCCCAATATCCAATAGGCACCACCAGCGCCACCACAGTGCAGGTGTACCTAGCTACATGGCCCCAACCCAGTCTGCAAAGGCCAAGGCTCGTAGTCAAGGCCTATTTAAGCATAGGGGTTCACCTGGGCCTCACTGGAACTCGTCCACGAGGAGAAGTTCTGCTATAGGGCTAGCCTGTGATTCATCTAGCTCTTGTGGGCCCACTGCAGCTCATGTGTTCCCAAGAAGTCCAAGCCCAAATATTAATGAAATTCGCCTCCAATCTAGACGGATTTCAGGTGGCAGTCCGGATAATGTTCACATTGAGGATTGGGCCCTTCCCCTTGGAACCAATGGTTGGACTTGA 1395 0.4889 MGKKGGSWFSSVKKVFKSSSKDSPVPEKKKDNNKEEQWQHEAPEEVSLEHFPAESSPDITYEGSATSTPVTEDRSHAIAFAAATAAAAEAAVAAAQAAARVVRLAGYGRQSTEEKAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRLQLTQEKFQRRVEEQVQRELEEQEQPKLLLSPIKMLDMDTWDSRRQSSQQIKENDLRKHEAAMKRERALAYAFNCQQQKQYMHIDPNGDDIGSYTNERERAQMDWNWLERWMLSQSHNSRHFGPRENLYRTLATTASTTDDMSEEKTVEMDMAATLDSAHANMGLIHRESFDTSPISNRHHQRHHSAGVPSYMAPTQSAKAKARSQGLFKHRGSPGPHWNSSTRRSSAIGLACDSSSSCGPTAAHVFPRSPSPNINEIRLQSRRISGGSPDNVHIEDWALPLGTNGWT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01429 464 MobiDBLite consensus disorder prediction 20 48 - -
Phco7g01429 464 Gene3D - 111 164 - -
Phco7g01429 464 MobiDBLite consensus disorder prediction 15 68 - -
Phco7g01429 464 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Phco7g01429 464 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Phco7g01429 464 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Phco7g01429 464 Pfam IQ calmodulin-binding motif 114 134 IPR000048 GO:0005515
Phco7g01429 464 Pfam Protein of unknown function (DUF4005) 350 418 IPR025064 -
Phco7g01429 464 PANTHER IQ-DOMAIN 5-RELATED 1 403 - -
Phco7g01429 464 SMART iq_5 135 156 IPR000048 GO:0005515
Phco7g01429 464 SMART iq_5 112 134 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01429 Phco-Chr7 13288278 13291799 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01429 7 13288278 13291799 Phco7g01429 7 13288278 13291799 ECH