Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01379 ATGCAGGTCTACAGTGTGTGTATAGACAGCGGTGACATTTTCATGCTTATCAGGACCTACCTTCTACCAGAGTCATACCAGAGTCGCGTTGAACCGGAGATGATTCATCATCCAGAACGTCGTCGTTTTTGGAATCGTCGATCTGGACCCGCCCCCACATCCTCCACCGTGTTTGCAAAATCAGAAAGAAAGGTTGAGATCAAAATAGTAGTTATGAGTTATGAGATGAGAGCAATGAGTCAACTCACTCGCGTTGAACCGTGTGTTGGTCCAGTGGACCCCATCCAGCTGGCTCTGGAAAGGGGGAAGGAAGAAGGCAAGAGAGAGTGGATCGATTCCTCTCAGCAGCACCAGACATTTATAAAAGCTCTTTTCCTTCCCCAAATCCCTCACAATCTTCCATTTTTACCTTTCTCTCTCGTTCGCCACACAAAAAATAATACAAAACAAAAAAAGAACAAGGATAAGAATAAGGAGAAGGTTTTCGCGATGGCGTCGAAGCGGATCTTGAAGGAACTTAAGGATCTCCAGAAGGATCCACCAACCTCTTGCAGCGCCGGACCTGTTGCTGAAGACATGTTTCACTGGCAAGCAACAATTATGGGTCCTCCAGACAGTCCTTATGCTGGAGGTGTTTTCCTAGTCACTATTCATTTCCCTCCAGACTATCCCTTCAAGCCACCCAAGGTTGCATTCAGGACTAAGGTATTTCACCCAAATATTAATAGCAACGGAAGCATTTGCCTTGACATCTTGAAGGAACAGTGGAGCCCTGCGCTAACTATTTCCAAGGTGTTGCTCTCAATTTGTTCCCTGTTGACGGACCCCAATCCCGATGATCCTTTGGTCCCCGAAATCGCCCACATGTACAAGACAGATAGGAACAAGTACGAGTCAACTGCCAGAAGCTGGACCCAGAAATATGCCATGGGTTAA 936 0.4658 MQVYSVCIDSGDIFMLIRTYLLPESYQSRVEPEMIHHPERRRFWNRRSGPAPTSSTVFAKSERKVEIKIVVMSYEMRAMSQLTRVEPCVGPVDPIQLALERGKEEGKREWIDSSQQHQTFIKALFLPQIPHNLPFLPFSLVRHTKNNTKQKKNKDKNKEKVFAMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYESTARSWTQKYAMG 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01379 311 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 192 298 - -
Phco7g01379 311 Gene3D Ubiquitin Conjugating Enzyme 155 311 IPR016135 -
Phco7g01379 311 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 237 252 IPR023313 -
Phco7g01379 311 Pfam Ubiquitin-conjugating enzyme 168 304 IPR000608 -
Phco7g01379 311 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 164 310 IPR000608 -
Phco7g01379 311 SMART ubc_7 167 310 - -
Phco7g01379 311 SUPERFAMILY UBC-like 147 310 IPR016135 -
Phco7g01379 311 FunFam Ubiquitin-conjugating enzyme 28, E2 164 311 - -
Phco7g01379 311 CDD UBCc 166 305 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01379 Phco-Chr7 12521140 12525360 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01379 7 12521140 12525360 Phco7g01379 7 12521140 12525360 ECH