Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01357 ATGGCACAGTTAGTGATGCGATTGAGACGCAGAAAGATTCCTGAGGAAACGGATAAGAATTGGATTTGTGAGGGAGTTGAAATGAAAGGCTGTTGGTTAGTTGGGGTCTTGATTGTGGTAGGGTGTGCCTGCTTGTTGGGGAGTGTTGGGGTAGAAGGGTACCCTGCTGAGGATCTGATAGAGAGGTTGCCTGGCCAACCTAATGTTGGGTTCAAGCAATATGCAGGGTATGTGGATGTAGATGTCAAGCATGGGAGAAGCCTCTTCTACTATTTTGTGGAGGCTGATAATGCTCATCACAACAAACCCCTCACTCTTTGGCTCAATGGAGGCCCAGGATGTTCCTCCATTGGAGGAGGTGCCTTTACTGAATTGGGTCCCTTTTATCCCAAAGGTGATGGACGTGGTCTTCGAAGAAATTCAATGTCTTGGAATAGAGCATCCAACCTCCTTTTCTTGGAGTCCCCAGCTGGAGTTGGTTGGTCATACTCAAACACAACTTCAGATTACAACTCTGGAGATGCATCCACAGCCAATGATACGCTTCTGTTCTTGCTGAAATGGTACGAGAAGTTTCCTTCTTACAGATCAAGGGAGCTGTTTCTTACTGGAGAAAGCTATGCAGGACATTATATACCACAGTTAGCCAATGTTCTTTTGGACCACAATGCTCATTCAAAAGGTTTCAAATTCAATATTAAAGGAGTTGCTATTGGAAACCCACTTCTGAAACTTGATCGTGATGCACAAGCAACATATGAATACTTCTGGTCACATGGACTGATTTCCGATGAAATTGGCCTTGCCATTGCAAATGATTGCGATTTTGATGATTATGTCTTCGCAAATACACACAACGTGTCCAAATCATGCAACCATGCAATAAATGAGGCAAATGAGATTGTTGGCGAGTACATAAACAACTATGATGTGATTCTGGATGTTTGTTATCCATCCATAGTTGAACAAGAACTGAGATTGAAAAAGATGGCTACTAAAATAAGCATAGGTGTAGATGTATGTATGAATTATGAAAGCGGTTTTTATTTAAACCTCCCTGAGGTTCAGAAGGCTCTCCATGCAAACCGTACTAATCTTCCGTACGAATGGTCCATGTGCAGTGGTGTCTTAAATTATAGCGACACTGATCCTAATATAGACATCCTCCCAGTTCTCAAAAGGATAGTTCAAAACCATATTCCAGTATGGGTTTTCAGTGGAGACCAAGATTCTGTTGTGCCATTACTAGGTTCTCGAACACTCATTCGTGAACTAGCTCACGAGCTAAAGTTCAAGATTACAGTCCCATATGGAGCATGGTTCCACCAAGGGCAGGTTGGAGGTTGGGTAACAGAGTATGGAAATTTGTTGACTTTTGCAACTGTAAGAGGAGCTGCCCACATGGTGCCCTTTGCACAACCTTCAAGAGCACTCCGTCTCTTTAGTTCATTTGTGCGTGGAATGAGATTGCCAAACACAACACGCCCTTCAATTCACTATTAA 1503 0.4298 MAQLVMRLRRRKIPEETDKNWICEGVEMKGCWLVGVLIVVGCACLLGSVGVEGYPAEDLIERLPGQPNVGFKQYAGYVDVDVKHGRSLFYYFVEADNAHHNKPLTLWLNGGPGCSSIGGGAFTELGPFYPKGDGRGLRRNSMSWNRASNLLFLESPAGVGWSYSNTTSDYNSGDASTANDTLLFLLKWYEKFPSYRSRELFLTGESYAGHYIPQLANVLLDHNAHSKGFKFNIKGVAIGNPLLKLDRDAQATYEYFWSHGLISDEIGLAIANDCDFDDYVFANTHNVSKSCNHAINEANEIVGEYINNYDVILDVCYPSIVEQELRLKKMATKISIGVDVCMNYESGFYLNLPEVQKALHANRTNLPYEWSMCSGVLNYSDTDPNIDILPVLKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELKFKITVPYGAWFHQGQVGGWVTEYGNLLTFATVRGAAHMVPFAQPSRALRLFSSFVRGMRLPNTTRPSIHY 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01357 500 Gene3D alpha/beta hydrolase 55 317 IPR029058 -
Phco7g01357 500 Gene3D - 388 487 - -
Phco7g01357 500 Gene3D - 341 377 - -
Phco7g01357 500 FunFam Carboxypeptidase 388 487 - -
Phco7g01357 500 FunFam Carboxypeptidase 54 318 - -
Phco7g01357 500 SUPERFAMILY alpha/beta-Hydrolases 61 490 IPR029058 -
Phco7g01357 500 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 60 474 IPR001563 GO:0004185|GO:0006508
Phco7g01357 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Phco7g01357 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 152 IPR001563 GO:0004185|GO:0006508
Phco7g01357 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 188 213 IPR001563 GO:0004185|GO:0006508
Phco7g01357 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 163 IPR001563 GO:0004185|GO:0006508
Phco7g01357 500 ProSitePatterns Serine carboxypeptidases, serine active site. 202 209 IPR018202 GO:0004185
Phco7g01357 500 Pfam Serine carboxypeptidase 65 487 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01357 Phco-Chr7 12292576 12296774 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01357 7 12292576 12296774 Phco7g01357 7 12292576 12296774 ECH