Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01342 ATGGCCCTGGAGAAGTGTTTAACAGTAAGCACTGCCACACCCCAATGCCTTTCTCCGTGCTTTCCAACTTCAAGGGAAAAGCTTGTTTTCCCAACCCACAGAGGTTTCAAGAAATCCATGCCAAACTCAAAACTCTCATACCAATCTCTCTATTCAACCTACCGAAAATCCCGTTTTGTTTGCAATGCTCGTGAAGCAGTAAATGAAGTAAAAGTGGTGACTGACGCAAGCTGGAATCAACTTGTGATTGCCAATGAAGCCCCTGTTCTGGTAGAGTTTTGGGCACCATGGTGTGGTCCATGCAGGATGATAGCACCTGTTATCGAAGAGTTAGCGAAGGAATATGGTGAAAAACTTGCATGCTACAAGCTTAACACAGATGACTCCCCAAACACAGCAACTCAGTACGGCATCAGAAGCATACCGACAGTTCTGTTCTTCAAGAATGGACAGAAAAAAGAAAGCATAATTGGTGCAGTTCCCAAGTCTACTCTGTCAGCGACAGTTGAAAAATATATTGATTTATAA 528 0.4337 MALEKCLTVSTATPQCLSPCFPTSREKLVFPTHRGFKKSMPNSKLSYQSLYSTYRKSRFVCNAREAVNEVKVVTDASWNQLVIANEAPVLVEFWAPWCGPCRMIAPVIEELAKEYGEKLACYKLNTDDSPNTATQYGIRSIPTVLFFKNGQKKESIIGAVPKSTLSATVEKYIDL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01342 175 Pfam Thioredoxin 70 170 IPR013766 -
Phco7g01342 175 SUPERFAMILY Thioredoxin-like 58 174 IPR036249 -
Phco7g01342 175 FunFam Thioredoxin 64 173 - -
Phco7g01342 175 ProSitePatterns Thioredoxin family active site. 90 108 IPR017937 -
Phco7g01342 175 Gene3D Glutaredoxin 70 174 - -
Phco7g01342 175 PANTHER GEO12009P1 64 173 - -
Phco7g01342 175 NCBIfam thioredoxin 74 172 IPR005746 GO:0015035
Phco7g01342 175 PRINTS Thioredoxin family signature 97 106 - -
Phco7g01342 175 PRINTS Thioredoxin family signature 89 97 - -
Phco7g01342 175 PRINTS Thioredoxin family signature 137 148 - -
Phco7g01342 175 ProSiteProfiles Thioredoxin domain profile. 39 174 IPR013766 -
Phco7g01342 175 CDD TRX_family 76 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01342 Phco-Chr7 12148000 12149353 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01342 7 12148000 12149353 Phco7g01342 7 12148000 12149353 ECH