Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01329 ATGGCATGGTGGTTCTTGCAAAGGTCTAGAATCTTCTTCTCTACTCATCAACACAGCAAGCCATTCTTATTACTACCATTTCTTAACCACACCTCTTCTTCCTTCTCTAGACCAAGAACACTGCCTCACAAAAACTCACCTACCCTTTTCTGCTTCTCGCGTCATGAATCAACCAAAGCTGATGCACAATTCGAATTGGAGAATGATTTCACTGAGGATGACACTAATCAGGAGATTGATTTTCCTGGAGGGAAAGTTGGATTTACTTCTGAAATGAGATTCATTTCCAAGTCTGCTACCAAAAGGGTGCCGTGTTATCGTGTTCTTGATGACAACGGTGAGCTGGTTAAATACAGCAACTATGTGCAGGTTAGCAAGGAAATGGGTGTGAAGATGTATTCTGACATGGTCATTCTTCAAACTATGGACAACATGTTCCATGAAGTGCAGAGGCAAGGTAGAATTTCCTTCTACCTCACCCAAATGGGGGAAGAAGCAGTTAACATTGCCTCTGCAGCTGCACTTGCTCCTGATGATATCGTATTGCCTCAGTACCGAGAACCTGGAGTTCTACTGTGGCGTGGTTTTACACTGCAACAATTTGTCCATCAGTGCTTTGGAAACACTCATGATCTGGGGAAAGGCAGACAGATGCCTATACATTACGGATCAAATCAGCACAATTACTTCACAATCTCATCCCCCATTGCAACTCAACTTCCTCAAGCTGTGGGAGCTGCTTATTCTCTTAAAATGGATGGCAAAAGTGCATGTGCAGTCACTTATTGTGGGGATGGTGGGACCAGTGAGGGAGATTTTCATGCTGGCATGAATTTTGCAGCAGTGATGGACGCCCCTGTTATTTTTATCTGTCGAAACAATGGATGGGCCATCAGTACACCAGTAGAAGAACAATTTCGAAGTGATGGAATTGTAGTGAAAGGTAAAGCTTATGGCATCTGGGGTATCAGAGTGGATGGAAATGATGTTCTTGCAGTTTATAGTGCAGTTCACACTGCTAGAGAAATCGCTATAAGAGAAAAAAGGCCTGTTTTAATTGAGGCTCTCACTTATAGAGTTGGACATCACTCTACATCTGATGATTCAACTAAGTACCGGGCAATTGATGAGATTGAATATTGGAAGACGAGAAGGAATCCTGTGAATAGATTCAAGAGATGGGTGGAAAAGAATGGTTGGTGGAGTGACAAGGAAGAATTGGAGCTTAGAAGCAGTATTAGGAAGCAGCTAATACATGCGATTGAGGTGGCAGAGAAAGCACAAAAACCTCCACTTGAGGACATGTTTAGTGATGTCTATGACCAACTGCCATCAAACCTTGAGGAGCAAGAGAGATTACTCAGGAAATCCATCAAGAAGCATCCCAAAGACTACCCTTCTGATGTTCCTTTGTAG 1416 0.4294 MAWWFLQRSRIFFSTHQHSKPFLLLPFLNHTSSSFSRPRTLPHKNSPTLFCFSRHESTKADAQFELENDFTEDDTNQEIDFPGGKVGFTSEMRFISKSATKRVPCYRVLDDNGELVKYSNYVQVSKEMGVKMYSDMVILQTMDNMFHEVQRQGRISFYLTQMGEEAVNIASAAALAPDDIVLPQYREPGVLLWRGFTLQQFVHQCFGNTHDLGKGRQMPIHYGSNQHNYFTISSPIATQLPQAVGAAYSLKMDGKSACAVTYCGDGGTSEGDFHAGMNFAAVMDAPVIFICRNNGWAISTPVEEQFRSDGIVVKGKAYGIWGIRVDGNDVLAVYSAVHTAREIAIREKRPVLIEALTYRVGHHSTSDDSTKYRAIDEIEYWKTRRNPVNRFKRWVEKNGWWSDKEELELRSSIRKQLIHAIEVAEKAQKPPLEDMFSDVYDQLPSNLEEQERLLRKSIKKHPKDYPSDVPL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01329 471 Pfam Dehydrogenase E1 component 136 431 IPR001017 GO:0016624
Phco7g01329 471 CDD TPP_E1_PDC_ADC_BCADC 132 424 - -
Phco7g01329 471 Gene3D - 74 469 - -
Phco7g01329 471 FunFam 2-oxoisovalerate dehydrogenase subunit alpha 74 470 - -
Phco7g01329 471 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 72 469 - -
Phco7g01329 471 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 103 466 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01329 Phco-Chr7 11964886 11969301 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01329 7 11964886 11969301 Phco7g01329 7 11964886 11969301 ECH