Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01280 ATGGATGTAGGTTGCAGCATGAGCTTATTGAGGCCTTCTGCAATATACAACTTTGTAACAACTTATCCTGCACTGCGATGGATGCCATGTCAGAGTTGGGGCTTCCTTCGATGGCCGGGTCTTGACGGATTCCTTAGGCTTTTGGTCGTCGGACTTCTCTGGTCCACCTTCTCCGAGCTTCGCTTCATACCCTCCTCTTCCATGTTCCCCACCCTTCGTGTTGGTGATCGAATTATTGTGGAAAAGGCTTCATATTATATCAAGAATCCTTCTATACATGATATTGTAACATTTAAGGATCCAACACAGTTATATGGAGAAAACACAGAAACTGTTTTTATTAAGAGAATTATAGCAAAAGCAGGAGACGCTGTTGAGGTTCATGATGGGGTACTCTACATCAATGGTGTTGCTCAGCAGGAAGATTTTATAGCACAACCACCAACATACACAATCCCATTAACTACTGTGCCCAATGGCCATGTTTATGTGCTAGGGGATAATCGTAATAATAGTTATGATTCTCATGTGTGGGGAACACTTCCTGTGAAGAACATAATTGGAAGATATGTGACTTGTTATCATAGACCAACAAACATTTGA 603 0.4179 MDVGCSMSLLRPSAIYNFVTTYPALRWMPCQSWGFLRWPGLDGFLRLLVVGLLWSTFSELRFIPSSSMFPTLRVGDRIIVEKASYYIKNPSIHDIVTFKDPTQLYGENTETVFIKRIIAKAGDAVEVHDGVLYINGVAQQEDFIAQPPTYTIPLTTVPNGHVYVLGDNRNNSYDSHVWGTLPVKNIIGRYVTCYHRPTNI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01280 200 Gene3D Umud Fragment, subunit A 65 197 - -
Phco7g01280 200 FunFam Peptidase/ serine-type peptidase 65 194 - -
Phco7g01280 200 ProSitePatterns Signal peptidases I serine active site. 65 72 IPR019756 GO:0004252|GO:0016020
Phco7g01280 200 PANTHER SIGNAL PEPTIDASE I 43 198 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phco7g01280 200 CDD S26_SPase_I 59 189 IPR019533 GO:0004252|GO:0006465
Phco7g01280 200 PRINTS Bacterial leader peptidase 1 (S26A) family signature 113 125 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phco7g01280 200 PRINTS Bacterial leader peptidase 1 (S26A) family signature 56 72 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phco7g01280 200 PRINTS Bacterial leader peptidase 1 (S26A) family signature 157 176 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phco7g01280 200 NCBIfam signal peptidase I 47 194 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phco7g01280 200 SUPERFAMILY LexA/Signal peptidase 57 194 IPR036286 -
Phco7g01280 200 Pfam Signal peptidase, peptidase S26 45 192 IPR019533 GO:0004252|GO:0006465
Phco7g01280 200 ProSitePatterns Signal peptidases I signature 3. 162 175 IPR019758 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01280 Phco-Chr7 11445548 11448816 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01280 7 11445548 11448816 Phco7g01280 7 11445548 11448816 ECH