Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01277 ATGGTGTCAATCATGCAGAGCTCTCAGCAATGGGTCGAGAAATACCGTCCAAGGAAAGTGAAAGATGTTGCCCACCAAGAGGAAGTTGTTCGAGTGCTAACAAATACCCTTGAAACTGGAAGTTGCCCCCACATGCTCTTCTATGGTCCTCCTGGTACTGGAAAAACAACTACTGCCCTTGCAATTGCCCACCAGCTTTTCGGGCCTGAGCTCTATAAGTCCAGGGTGCTGGAGCTGAATGCAAGTGATGATAGAGGGATTAATGTCGTTCGTACAAAGATAAAAGATTTTGCTGCTGTGGCTGTTGGTACTAACAAGCGTAAGAAGGGTCATCCTTGTCCACCATTTAAGATTATTGTTCTAGATGAGGCTGATTCTATGACAGAAGATGCTCAGAATGCCCTGAGGCGTACAATGGAAACTTACTCTAAAGTTACAAGGTTCTTTTTTATATGCAACTATGTGAGCAGGATTATAGAACCACTTGCTTCAAGATGTGCTAAATTCAGGTTCAAGCCATTGTCAGAAGAAATCATGAGCAGCCGGATATTGTACATATGCAAAGAAGAGGGACTCTGTCTTGATGCTGAGGCTCTTTCAACCCTTAGCTCTATTTCTCATGGAGATCTTCGCCGGGCAATCACATACTTGCAGTCAGCAGCTCGCTTATTTGGATCTTCTATTTCTTCAGAGAATCTGATTTCTGTGTCTGGGGTTGTTCCAGAAAAAGTTGTGGAGGCAGTTCTTCAAGCTTGCAGAAGTGGTAATTTTGATTTTGCAAACAAGTCAGTCAACAATTTCATTGCAGAGGGATATCCAGCTTCTCAAATGCTTACTCAGTTATTTGAAGCCATTGTTGAAGAAAACGATATATCAGATGAACAGAAAGCAAGAATATCCAAGAAGCTGGGTGAAGCTGATAAGTGTCTAATTGATGGTGCTGATGAATACTTGCAACTTCTCGATGTGGTCAGCAATACAATGCAGGCTTTTAGCAACATGCCAGAAAGATTTGCTTACGAGTGTTAG 1029 0.4247 MVSIMQSSQQWVEKYRPRKVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKRKKGHPCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSRILYICKEEGLCLDAEALSTLSSISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPEKVVEAVLQACRSGNFDFANKSVNNFIAEGYPASQMLTQLFEAIVEENDISDEQKARISKKLGEADKCLIDGADEYLQLLDVVSNTMQAFSNMPERFAYEC 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01277 342 Gene3D - 2 173 IPR027417 -
Phco7g01277 342 Pfam ATPase family associated with various cellular activities (AAA) 45 172 IPR003959 GO:0005524|GO:0016887
Phco7g01277 342 SUPERFAMILY post-AAA+ oligomerization domain-like 240 325 IPR008921 GO:0003677|GO:0006260
Phco7g01277 342 Gene3D - 240 329 - -
Phco7g01277 342 CDD HLD_clamp_RFC 174 233 - -
Phco7g01277 342 FunFam Replication factor C subunit 4 176 239 - -
Phco7g01277 342 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 9 321 - -
Phco7g01277 342 CDD AAA 26 166 - -
Phco7g01277 342 FunFam Replication factor C subunit 4 240 329 - -
Phco7g01277 342 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 232 IPR027417 -
Phco7g01277 342 FunFam Replication factor C subunit 5 3 174 - -
Phco7g01277 342 Gene3D - 176 239 - -
Phco7g01277 342 SMART AAA_5 41 190 IPR003593 GO:0016887
Phco7g01277 342 Pfam Replication factor C C-terminal domain 240 325 IPR013748 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01277 Phco-Chr7 11415254 11422176 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01277 7 11415254 11422176 Phco7g01277 7 11415254 11422176 ECH