Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01275 ATGGCTAGCTTGATGCAACAACAACCAAAGGGAGTTAATGGAGGTAGCAGCCGCATAGTTGCAGTCAATGTCACTCCCTCTAACCATCTTCCTACATCATCTCATCACGATGATGCCTCCTCAAATCATGAGAAGCCTGGGTGGAAAAAGTTCATGGCATATGTAGGACCTGGCTTTCTGGTCTCCTTGGCTTACCTTGATCCTGGAAACATGGAAACTGATCTGCAAGCTGGAGCTGACCACAAATATGAGCTGCTGTGGGTAATACTTATTGGACTGGTGTTTGCGCTTATAATTCAATCCTTGGCTGCGAATCTGGGCGTAAGCACTGGAAAACACCTTTCAGAATTGTGTAAAGCCGAATATCCATTATTGGTAAAGTACTGCTTATGGTTATTAGCTGAGCTCGCTGTCATAGCTGCAGACATACCTGAAGTGATTGGCACAGCCTTCGCGTTGAACATACTTTTCCACATCCCTGTATGGGCAGGAGTTCTCATAACTGGCTGCAGCACCCTCTTATTTCTTGGTCTGCAGAGATTTGGGGTAAGGAAGCTAGAACTGCTGATATCAGTGCTAGTTTTTGTAATGGCTGGATGTTTCTTTGGGGAAATGAGCTACGTAAAACCACCTGCATCTGGTGTTTTAAAAGGAATGTTTGTGCCAAAACTCAGTGGTCAGGGAGCTACAGGCGATGCTATTGCTCTTTTGGGTGCCCTTGTCATGCCGCACAATCTTTTCCTCCACTCTGCTCTGGTCCTGTCAAGAAAAGTACCCAGTTCCGTGCGTGGCATCAATGATGCATGTAGATATTTTCTCATAGAAAGTGGGTTTGCACTCTTTGTGGCATTCCTAATCAATGTAGCGATGATTTCTGTGTCCGGAACTGTTTGCGCTGCTGAAAATCTTTCTGCAGAAAATGCCCATCAGTGCAGCGATCTTACCCTTAACTCTGCTTCTTTCCTTCTCAAGAACGTGTTGGGACGGTCGAGCTCTACCATTTATGCCATAGCACTGCTAGCCTCAGGACAAAGTTCAGCCATCACTGGAACCTATGCAGGGCAATACATCATGCAGGGTTTCTTGGACATGAGGATGAAAACATGGATTAGAAACTTTGTGACTAGGTGCATTGCCATAACACCTAGTCTTATTGTTTCGATCATTGGGGGTTCTCAAGGAGCTGGTCGGCTTATCATCATTGCATCGATGATACTTTCATTTGAGCTTCCATTCGCTTTAATTCCTCTCCTTAAGTTCAGCAGCAGTAGTACAAAGATGGGACCTCACAAGAATTCTATAATTATAATTGTGATCTCTTGGATTCTGGGCTTGGGAATCATTGGTATCAATGTGTACTACCTTTCTACTGCCTTCGTGGGTTGGTTAATTAATAACAGTGTACCAAAGGTGGCAAATGTGTTCATTGGGATCATAGTGTTTCCTCTAATGGCACTTTATGTCGGCGCAGTAATATACCTAACCTTCAGAAAAGACACTGTTAAGACGTATATTGAGAGAAAGAATGAAGGAGCAATGCAAACCCACATGGAAAAGGGGTTTATGGTTGATGGTCAATTAGAGTTGAGTGAAGTTCCCTACAGAGAAGACTTGGCTGATATCCCCCTACCACCATAG 1638 0.442 MASLMQQQPKGVNGGSSRIVAVNVTPSNHLPTSSHHDDASSNHEKPGWKKFMAYVGPGFLVSLAYLDPGNMETDLQAGADHKYELLWVILIGLVFALIIQSLAANLGVSTGKHLSELCKAEYPLLVKYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWAGVLITGCSTLLFLGLQRFGVRKLELLISVLVFVMAGCFFGEMSYVKPPASGVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPSSVRGINDACRYFLIESGFALFVAFLINVAMISVSGTVCAAENLSAENAHQCSDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDMRMKTWIRNFVTRCIAITPSLIVSIIGGSQGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIIIIVISWILGLGIIGINVYYLSTAFVGWLINNSVPKVANVFIGIIVFPLMALYVGAVIYLTFRKDTVKTYIERKNEGAMQTHMEKGFMVDGQLELSEVPYREDLADIPLPP 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01275 545 PRINTS Natural resistance-associated macrophage protein signature 371 388 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g01275 545 PRINTS Natural resistance-associated macrophage protein signature 183 204 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g01275 545 PRINTS Natural resistance-associated macrophage protein signature 130 156 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g01275 545 PRINTS Natural resistance-associated macrophage protein signature 233 256 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g01275 545 PRINTS Natural resistance-associated macrophage protein signature 403 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g01275 545 PRINTS Natural resistance-associated macrophage protein signature 158 177 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g01275 545 PRINTS Natural resistance-associated macrophage protein signature 343 362 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g01275 545 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 37 503 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g01275 545 Pfam Natural resistance-associated macrophage protein 72 433 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g01275 545 Hamap Divalent metal cation transporter MntH [mntH]. 36 459 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g01275 545 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 49 425 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g01275 545 NCBIfam Nramp family divalent metal transporter 56 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01275 Phco-Chr7 11395867 11400078 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01275 7 11395867 11400078 Phco7g01275 7 11395867 11400078 ECH