Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01271 ATGAAGTCGTTGCATTTGCGACCCTTCAAGGTCTCTCTCGCGGCCATGACCACGAAGAAGAGAAAAAGATCCCCAAAACAGTTCCCAGCCCCTCCCTCAACGCCCCCAACTCCCCAAACTCAGGCCCGCCACTCCCTTAACACCGCAAAAGCCCGGGCCTGGGCCCCTCTCGACTTGACCCAGGCCGAACTCTCTTTGCCACTCACCTTCCCCACGGGCCAAACCTTCCGCTGGAAAAACACCGCCCCTCTACAATACACCGGCGTCGTTGGGCCCCACCTCATAACCCTCAAACACCTCCAAAATGGCGACGTTTCCTACTGCCTCCACTCCCACTCTAACCCCGAAAAAGCCAAAACCGCCTTGCTAGATTTCCTTAACGCCGCCGTTTCTCTCGCCGACTTATGGAAGGCGTTTTCCGCTTCCGATGCGAGGTTCGCGGCGCTAGCGCTCCATTTGAGCGGTGCGAGGGTGCTCCGGCAAGACCCTTTCGAGTGTTTGATTCAGTTTCTATGCTCTTCCAATAACAACATTGCACGAATCACGAAGATGGTTGACCACGTTTCGTCTCTGGGAATGCGCGTGGGAGACGTTGGAGGATTTCAGTTCCACGTTTTCCCTTCCCTGGAGCAACTTTCCTCCGTCTCGGAGCAACAACTCAGAGACGCGGGTTTCGGTTACAGGGCTAAATATATAATTGGTACGGTTAATGCTTTGCGATCAAAACCTGGTGGAGGGGAAGAGTGGCTTCGTTCTCTTCGTAAGTTGGATCTTCCAGATGTTATATCTGCACTTTCTACGTTACCTGGTGTGGGTCCTAAAGTGGCTGCTTGCATTGCTCTCTTCTCGCTTGATCAACATCATGCCGTTCCTGTTGACACTCACGTCTGGCGGATTGCCACCAAGTATCTCTTACCTGAGCTTGCAGGTTCCCAGTTGACACCAAAGCTCTGTAATCGTGTTGCAGAGGCATTTGTTACCAAGTATGGTAAATATGCTGGGTGGGCGCAGACTCTATTGTTCATAGCCGAATTACCTTCACAGAAGGCCATCATACCTTCACATTTGTGGACTATCAGACAACGAAATCCTGCAAAGATAGAAGATGGCCAAGAAGTTGGGTGA 1125 0.52 MKSLHLRPFKVSLAAMTTKKRKRSPKQFPAPPSTPPTPQTQARHSLNTAKARAWAPLDLTQAELSLPLTFPTGQTFRWKNTAPLQYTGVVGPHLITLKHLQNGDVSYCLHSHSNPEKAKTALLDFLNAAVSLADLWKAFSASDARFAALALHLSGARVLRQDPFECLIQFLCSSNNNIARITKMVDHVSSLGMRVGDVGGFQFHVFPSLEQLSSVSEQQLRDAGFGYRAKYIIGTVNALRSKPGGGEEWLRSLRKLDLPDVISALSTLPGVGPKVAACIALFSLDQHHAVPVDTHVWRIATKYLLPELAGSQLTPKLCNRVAEAFVTKYGKYAGWAQTLLFIAELPSQKAIIPSHLWTIRQRNPAKIEDGQEVG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01271 374 Gene3D - 135 345 IPR023170 -
Phco7g01271 374 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 57 167 IPR012904 GO:0003684|GO:0006289|GO:0008534
Phco7g01271 374 SMART endo3end 172 345 IPR003265 GO:0006284
Phco7g01271 374 SUPERFAMILY TATA-box binding protein-like 51 161 - -
Phco7g01271 374 Pfam HhH-GPD superfamily base excision DNA repair protein 168 303 IPR003265 GO:0006284
Phco7g01271 374 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 41 355 - -
Phco7g01271 374 FunFam N-glycosylase/DNA lyase OGG1 283 345 - -
Phco7g01271 374 SUPERFAMILY DNA-glycosylase 162 343 IPR011257 GO:0003824|GO:0006281
Phco7g01271 374 FunFam N-glycosylase/DNA lyase 162 286 - -
Phco7g01271 374 Gene3D Hypothetical protein; domain 2 162 286 - -
Phco7g01271 374 CDD ENDO3c 164 342 IPR003265 GO:0006284
Phco7g01271 374 MobiDBLite consensus disorder prediction 15 46 - -
Phco7g01271 374 Gene3D - 40 126 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01271 7 11373154 11374591 Phco7g01271 7 11373154 11374591 ECH