Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01239 ATGGACGCCACCGTCATGGACTGCAGTCCTTCCTCCAATGCCGCGCCGCCCCGCCGCAGTGGTCGCCGGAAGATGGTTCAATCGACGCTCTTCCCTCTCAAGCCACTGGAGCCCGTTGAGAAGAACGACAAAAAGGAAGAACGCGACGAGGATTACTCTGAGGCTGAGAATAACAAGAAGAAGAGGAAGAGATCCAAGGCAAAAGTCACTCCTCCGAAAAAAGGTTCTTCTAAGAGCCCCGCGCCAAAGAGAAAAGCAACTGCTAATGGTACTAAGGGATTAACTTCGGGGCAGGTGTTGGCTAATTCCGATGAGGTTAAGGCACCCGTGTATGATTTGTTTCTAGAAGCAAAACTGTCTGCTGAGGAAGATTCGAGGGTGTATGCAGGACGTCAGGTACATCCTTTTTTTTCATTATGGAAGGAGGCAAAAAAAGTTCATGATGTGAGTGAATCAGGAAGTAATTTACCAACAGCTAAGAGCAAGCATAAAAGGGCTACTTGTGGCCCTATTCATGTATTTGAGAATGTTAAGGATGATACCTCATCTATTGACTGGAGAAACTGGACGTTTATGGGGAATACCTCCTCTATGAACTATGGTCAAGAAAGTCTAAATTCATCTGTTTTGGAGGGTTCCGTTGAATCCTTAAATTTTGATAAGCTTCACAGTTCTTTGAATCCGTCGGGCGTTTCAATTTCTCAGAATGCCTTATCTTCAGATAGACTTTCTATAATTCCGAAAAAACTGGAAGAAGCATCAAGTCCAGCTTCCCTAGCAGAGCAAACATGTCTGATGTCTGAAAATGCCGAACTGGACATGGAAGTGGATGAATCTGTTGCTACAACTGTGCTAGCTGGCATATTTAGAAAGTCTAAAGATACTGAACGACCAAGTAGATTTCTTCAAGAAAGTATGAGATCATACTACCATAGTTGTGTAGATATGGAGGAGTGCAACTTATGGACATACAAATACATGCCAAAGAAGGCTGTTGAGGTATGTGGGAATGATGAATCTGTTAATTTATTGAGTGACTGGTTACGTTGTTGGCATGAAAGGCGATATAAAAGCAGGAAGGATAATGCTGACATGGATAAAAGTGACATACAAGATGTTGAAGATGACGATGATGATTATAAATGTTCTTACAGTGACTACGATTCGGAAAATATAAATGAGAAGGATTCCCTGCAAAAAGTTCTTTTAATTACAGGGCCAATTGGGAGTGGCAAGTCTTCAGCAGTCTATGCTTGTGCCAAAGAGCAAGGGTTTAATATTTTAGAGATCAATTCATCACATTCTAGAAATGGGACTGCTATCAGGAACTTGGAATATTCTCTTACTTCACATGGGTTCAAAAGGCAATCAGGAAACACTGCACGTTCACATAAGACCTCTACAAAATTGCCCCAAGCTCCGGCTATGCTCAGTGGTAAAGCTGCTGATGAGGCTAATGGAGTGGATGAACTGTTAACCATATCCGATGATGAAGCTCAAAGCCCTAGTGGATCAACATTAAAGTTACATGGTGAAAATGATGGTACTGGAAAATATAATGTCCATCATCTAGTTCTAGTTGAGGATGTGGACATCCTTTTTGCCGAAGACCGTGGATGTATTGCTGCCATACAACAGATTGCTGAGACTTCAAAGGGGCCAATTATATTGACCAGTAATAGTGATAATCCTGGTCTGTCACAGAAGTTTGACATGCTCCATGTTCCATTCGTGTTGCCATCACCGAAGGAATTGCTTTGCCATTTGTACACTGTTTGTCTCACTGAAGGAATCAGCATCCATCCTCTTTTACTAGAGAAGTTTATACATTCTTGTGATGGAGATATCCGAAAAACCATTATGCATCTTCAATTCTGGTTTCAGACTAAAACATTTCAAAAAGATGAAAAGGCACAAACAGGTTATAGCTCACTTTCATTTGATCTTGAGCTTGGCCATCAGATTCTACCGAAGATAATGCCCTGGGATTTTCCCTCGGTGATATCCGAACTAATTGAGAGTGAAATAGCCAAACCAACAAATATAATGGAAGAAAACTCCAAGGGGTTAGTTACAAAAGATCTTCAGTTAAGTGAATGGCAGAAAGATTTAAATGCGAAGTATATGGAGACTGATGATATAGAGGCCATGAAGGTGGAGATGATTAAGAGGAATGGATCGTTGACAGATTACTATGAGCTTGAAATTCAACGTAGCACTATTTCTGACTTTTCCAATTCTTCTGGTTCCCCACTTGCATCCTCTAGGCATAATGGGCGAAGGAAACTTGTAGTTATGTCCTCTGAGTCTGAGGACGAGGATTCAAATAATGGCTATCCTGTAGACTCCCATGATGAAGCTAATACCAGACAACTGATGAAAGAAAATAATCGCAGTCCATCAGAATTTCATTTAAATGGGAACTACCCCGACACATCAGTTCACAGAATAGTTTGTTCCGATTTGGAGCATTCAGAGGAGGAATATTTTAAATATTCAGAAACGGCTGATGGTACATACTTAAATGAAACATGTAAATCATTAGATGTATCATGTGTGCCAGAATCAACGTTTGTTCCTGAAACCGAAATTGAAAATGGAACAGAGACAATGTCTGGAGCCGTGTCTTCTGGTCCTGCTGACCCTCTTGTTAGTCTTCGAGAAGTATCTGTGAATAATGAGTTGAAACCATTCAATTTCAATGCTCGTAGGCGCTTAACAAAATTGTCCCAGAATCCTGATTTGTTGGCGGATACTGAAATTCCAGACCATTCTCTTGAAGGGGTTCAGCATGATGTTCAAGATGAACATACTGAAACAATTGTTAAAGTGATGGATGAGTGCAGTCGAATTGATTTCAAACTAAAGCCAACATTGTTGCAGTCCAATCCATTAGACGAGACAGAAAAGATACAAAACGTGTGGAGAGATCTCCGTGATCGTCGAGTGGATTTAAGACAGCATTCTATCTCAGAAGAGCTTGGTGCTTTTCAAGTTGTTAAACTTGCTAGTGGACTGTGCAATCTAATTTCAGATGCTGACTTGTTTCCAAAATGGGATATAATGGAACCTTCAACGTTCCTTTCTAATGAAGCCGCATCAAATGGGTATTGTGGAGAAATGATGTCCACTGTGGCTGAGCATGGGTTTTGCTTTTACGCTAAGCTTATAGCAGAAGAAGGATCAAAGTTGGGTTGTGCAAATTGTGTTGATATTGCCTCTGAGATGTTGGCTTCCTCCACTGATATTATGGCATTAGGGAAATTATCCCGAGAGGATTTCACCAAAATGAAAGCTTTCCATACTGGAAATGAAGTAGAGTGGAACACCCCAATAAATAATATCCAAAAGAGTGAAAAGAAAAGATCTCTGATCGAGGTCATCCAATCCATTGCTCCCGCGAGAACATCCTTGGCATTAAAAGGTTGTGCATTCAACGAATATCTATCTTCATTACGCCAAATTTCGAGGTCTGAGGCTTTCCGCATTTCAAAAGAGATCGAAAAGAAGAGAGGACGAAGGGTACGGGGCGTTCAGCATTACTTGAGCACATTTACCAAGTTGTCTCCAGAAGATATATCTTTGGTGACCGATGGTGAACTGTACAGAAAAATTTCTTCCCAACATTCATAG 3633 0.4099 MDATVMDCSPSSNAAPPRRSGRRKMVQSTLFPLKPLEPVEKNDKKEERDEDYSEAENNKKKRKRSKAKVTPPKKGSSKSPAPKRKATANGTKGLTSGQVLANSDEVKAPVYDLFLEAKLSAEEDSRVYAGRQVHPFFSLWKEAKKVHDVSESGSNLPTAKSKHKRATCGPIHVFENVKDDTSSIDWRNWTFMGNTSSMNYGQESLNSSVLEGSVESLNFDKLHSSLNPSGVSISQNALSSDRLSIIPKKLEEASSPASLAEQTCLMSENAELDMEVDESVATTVLAGIFRKSKDTERPSRFLQESMRSYYHSCVDMEECNLWTYKYMPKKAVEVCGNDESVNLLSDWLRCWHERRYKSRKDNADMDKSDIQDVEDDDDDYKCSYSDYDSENINEKDSLQKVLLITGPIGSGKSSAVYACAKEQGFNILEINSSHSRNGTAIRNLEYSLTSHGFKRQSGNTARSHKTSTKLPQAPAMLSGKAADEANGVDELLTISDDEAQSPSGSTLKLHGENDGTGKYNVHHLVLVEDVDILFAEDRGCIAAIQQIAETSKGPIILTSNSDNPGLSQKFDMLHVPFVLPSPKELLCHLYTVCLTEGISIHPLLLEKFIHSCDGDIRKTIMHLQFWFQTKTFQKDEKAQTGYSSLSFDLELGHQILPKIMPWDFPSVISELIESEIAKPTNIMEENSKGLVTKDLQLSEWQKDLNAKYMETDDIEAMKVEMIKRNGSLTDYYELEIQRSTISDFSNSSGSPLASSRHNGRRKLVVMSSESEDEDSNNGYPVDSHDEANTRQLMKENNRSPSEFHLNGNYPDTSVHRIVCSDLEHSEEEYFKYSETADGTYLNETCKSLDVSCVPESTFVPETEIENGTETMSGAVSSGPADPLVSLREVSVNNELKPFNFNARRRLTKLSQNPDLLADTEIPDHSLEGVQHDVQDEHTETIVKVMDECSRIDFKLKPTLLQSNPLDETEKIQNVWRDLRDRRVDLRQHSISEELGAFQVVKLASGLCNLISDADLFPKWDIMEPSTFLSNEAASNGYCGEMMSTVAEHGFCFYAKLIAEEGSKLGCANCVDIASEMLASSTDIMALGKLSREDFTKMKAFHTGNEVEWNTPINNIQKSEKKRSLIEVIQSIAPARTSLALKGCAFNEYLSSLRQISRSEAFRISKEIEKKRGRRVRGVQHYLSTFTKLSPEDISLVTDGELYRKISSQHS 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01239 1210 MobiDBLite consensus disorder prediction 743 784 - -
Phco7g01239 1210 Gene3D - 580 644 - -
Phco7g01239 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 320 628 IPR027417 -
Phco7g01239 1210 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 11 1207 IPR004582 GO:0006281
Phco7g01239 1210 MobiDBLite consensus disorder prediction 1 96 - -
Phco7g01239 1210 MobiDBLite consensus disorder prediction 1 16 - -
Phco7g01239 1210 MobiDBLite consensus disorder prediction 37 60 - -
Phco7g01239 1210 Gene3D - 320 573 IPR027417 -
Phco7g01239 1210 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 582 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01239 Phco-Chr7 10976048 10985052 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01239 7 10976048 10985052 Phco7g01239 7 10976048 10985052 ECH