Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01226 ATGGTTAAGTCAGAGCACAAGATCAAAACAGAACCATCATCAAAGGCAATGCGGTCTATATCCTCGTTATCAGCATCATCACCAGCACCAGCATCAGCATCAGATAGCAAGAAGAGGAAATACAAGGGAGTGAGAATGAGGAGCTGGGGATCATGGGTTTCAGAGATCAGAGCACCAAACCAGAAAACAAGAATATGGTTAGGCTCTTATTCAACCCCAGAGGCTGCAGCTAGAGCCTATGATGCTGCACTTCTATGCCTCAAAGGCTCCTCAGCTAATTTTAATTTCCCTTTAAGCTCTTCACAATATATTCCTGGAGATGCTGTCATGTCCCCCAAATCAATCCAAAGAGTTGCTGCAGCTGCTGCAAATAGTTTCATTGACAATGCCACCATTCCCCTTTCTGCTTCTCCAGCTTCAACCTCGTCATCATCGTTGGTCTCATCCCCCTCAATGGCTTCTTCTCCTTCGGATCAAGTCGATGATGATGCCTCACCGATGTCGTCTTTGGAAGCCTACACTAGTTGTGATCAAGCAAATGAATCAATGGCTATGAATGTGATGGAACCTTGGTACACTTTAGATGATCTTCAATCCCCCAAGTATGTTGATCAGATGTTAAGTGGTGCTTTCTTTGATTTTGATTCGTCCCATCTGCTTGATGATCTATACGAAGAAAGTGACATCCGTTTGTGGAGCTTCTGCTGA 708 0.4435 MVKSEHKIKTEPSSKAMRSISSLSASSPAPASASDSKKRKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANFNFPLSSSQYIPGDAVMSPKSIQRVAAAAANSFIDNATIPLSASPASTSSSSLVSSPSMASSPSDQVDDDASPMSSLEAYTSCDQANESMAMNVMEPWYTLDDLQSPKYVDQMLSGAFFDFDSSHLLDDLYEESDIRLWSFC 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01226 235 FunFam ethylene-responsive transcription factor ERF014-like 39 99 - -
Phco7g01226 235 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Phco7g01226 235 CDD AP2 40 99 IPR001471 GO:0003700|GO:0006355
Phco7g01226 235 Gene3D AP2/ERF domain 39 99 IPR036955 GO:0003700|GO:0006355
Phco7g01226 235 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Phco7g01226 235 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Phco7g01226 235 SUPERFAMILY DNA-binding domain 40 99 IPR016177 GO:0003677
Phco7g01226 235 MobiDBLite consensus disorder prediction 14 33 - -
Phco7g01226 235 MobiDBLite consensus disorder prediction 1 44 - -
Phco7g01226 235 Pfam AP2 domain 40 89 IPR001471 GO:0003700|GO:0006355
Phco7g01226 235 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Phco7g01226 235 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 24 173 - -
Phco7g01226 235 MobiDBLite consensus disorder prediction 137 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01226 Phco-Chr7 10782403 10783110 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phco7g01226 AP2 4e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01226 7 10782403 10783110 Phco7g01226 7 10782403 10783110 ECH