Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01224 ATGTCGTTGAGTCCTCCGAGAGAGAGATACAATGGGCATGGCCGAAGGCGAGAGAGGCAAACGTTCCAGATGTACTGGTGCTTCCAGTGCAACCGCATGGTCCGCATCGCAGTGGATAACAACCCCTCAGAGGTCACGTGTCCACGCTGCTTCGGCCAATTCATATGCGAAGTAAACATGCCGCGCCCAAGACTCGTGGTCGATTTCACTACCCCAGACCCCTCCCCAGAAGCGCGTTTGCTCGAAGCGCTTTCCCTCATGATGGACCCACCCATCCGCCGTTTCCCGGGTCTCCACCAATCCCAACCAGAAGAGGTCCCCGTGCACCACCGCCGACGCCGCTTCCGCCGACGCCAACCCGAACCTGAACCTGAACCCGTCCCTGAACCTGCACACCACCGCCCTCGCACGTGGATAGTTTTCCAGCCCATGGACCAACCCAACCCCTTCCTGCCCATTAACAACATTCCTAACCGCCCAGGCCCAGGCCAATTCCAATTCCCGCTCCCGCACACCGTGGACACGCGCGACTATTTCATGGGACCTGGACTCAACGAACTCATCGAACAGATAACCGAGAACGACAGACAGGGTCCCGCGCCGGCGCCGGAGAGGGCCATCGACACGATTCCGACGGTGAAAATTGCGAGCGCGCATCTGAAGGAGAATTCTCAGTGTCCAGTTTGTCAGGAGGAATTCGAAGTTGGCGGAGAAGCGAGGGAACTTGCGTGCAAACACATATATCACTCGGATTGCATTGTACCGTGGCTGAGGCTTCACAATTCTTGCCCAGTGTGCCGTCACGAGGTTTCTGTGCCGTCTTCTTCGGAGGAGGAGGATGAGTGTGTTGATGTTAGCGGAGATGAAGGTAGGTTGCGGAGGTGCTTGAGGTGGACCCGTCGTTTTACTTCGGTTTGGCCTTTCAATTCGAGGTATAGACGGGTTCACCCTCAAGGAAATAATAATGTTGCTGCTGCTTCTTCCAGGGTGTTTCATACTTGTGTTACTGTTGCTGTCACTACTGATATTTTGCCTCTGACAGTCCGACACTCTCTAGAGCTAATAGGAGGCAACCCTCTTGCTGCATTCTTTAAGCTCTACAATTATTTACATCCAAGGCTGATCAACTGGTTAGGGTTACAGCTTGTCCATAAAGGCATTAGACATGATCACCAGGGTAACATGGGCTTGCGATTCAAAGATAAAGTAAAAGTTTCATTCAAATTGAATATTGGGTTCATCACCACATACTACGACGTTCGAGATCCGCATGATACTGCCACTGTAAATATTATTTGTTATTGGCAATGA 1311 0.524 MSLSPPRERYNGHGRRRERQTFQMYWCFQCNRMVRIAVDNNPSEVTCPRCFGQFICEVNMPRPRLVVDFTTPDPSPEARLLEALSLMMDPPIRRFPGLHQSQPEEVPVHHRRRRFRRRQPEPEPEPVPEPAHHRPRTWIVFQPMDQPNPFLPINNIPNRPGPGQFQFPLPHTVDTRDYFMGPGLNELIEQITENDRQGPAPAPERAIDTIPTVKIASAHLKENSQCPVCQEEFEVGGEARELACKHIYHSDCIVPWLRLHNSCPVCRHEVSVPSSSEEEDECVDVSGDEGRLRRCLRWTRRFTSVWPFNSRYRRVHPQGNNNVAAASSRVFHTCVTVAVTTDILPLTVRHSLELIGGNPLAAFFKLYNYLHPRLINWLGLQLVHKGIRHDHQGNMGLRFKDKVKVSFKLNIGFITTYYDVRDPHDTATVNIICYWQ 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01224 436 MobiDBLite consensus disorder prediction 118 132 - -
Phco7g01224 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 273 IPR013083 -
Phco7g01224 436 Pfam zinc-ribbon 23 57 IPR039525 GO:0061630
Phco7g01224 436 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 126 270 - -
Phco7g01224 436 ProSiteProfiles Zinc finger RING-type profile. 226 267 IPR001841 -
Phco7g01224 436 Pfam Ring finger domain 225 267 IPR001841 -
Phco7g01224 436 SMART ring_2 226 266 IPR001841 -
Phco7g01224 436 SUPERFAMILY RING/U-box 206 273 - -
Phco7g01224 436 FunFam E3 ubiquitin-protein ligase RING1-like 189 273 - -
Phco7g01224 436 MobiDBLite consensus disorder prediction 95 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01224 Phco-Chr7 10757424 10759805 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01224 7 10757424 10759805 Phco7g01224 7 10757424 10759805 ECH