Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01222 ATGCAGCAGGTCTATGCTAACTCCCCATATATACTCATGAGATTCACGCCTTCATCGAAGTTCTTAGGCTTTTCAAATCACTTCAACAACCTTCTCGCACCCTCTTTTTCTCTAACCTCAAAGTTCCCATCTTCCATTTCCGCCACCATGTCCACTGTTTCCACTCAGAATGACACCGTCACCCACAAAACGCATCAACCTTTGCAAATTGCAAAGCGCTTAGAGAAATTTCAGACAACAATCTTCACTCAAATGAGCTTGCTTGCCATCAAACATGGAGCCATAAACCTAGGTCAAGGCTTTCCCAACTTTGATGGTCCAGACTTTGTAAAGGAAGCAGCTATTCAAGCAATCAGGGATGGGAAAAATCAGTATGCCCGGGGTTATGGAGTTCCAGACCTTAACATTGCCATTGCTGAGAGATTTAAGAAAGATACTGGATTAGTGGTAGACCCCGAAAAGGAAGTTACTGTTACATCTGGATGCACTGAAGCAATTGCTGCTACTATACTAGGAATAATAAATCCCGGTGATGAGGTTATTCTGTTTGCTCCTTTTTATGATTCTTATGAGGCCACTTTGTCTATGGCCGGTGCAAAAGTCAAAAGCATTACTTTGCGCCCTCCAGATTTTGCTGTCCCTATTGAAGAGCTGAAGTCAACCATCTCAAAGAATACCCGTGCCATTCTTTTAAATACACCTCACAACCCTACTGGAAAGATGTTCACTCGCGAGGAGCTTGATTGCATTGCATCTCTTTGCATTGAGAATGATGTGCTGGTTTTCACTGATGAGGTTTATGATAAGTTGGCTTTTGATATAGAGCACATTTCGATGGCTTCTTTGCCTGGGATGTTCGAAAGGACAGTGACAATGAATTCCTTGGGGAAGACATTCTCCTTAACTGGATGGAAAATTGGTTGGGCAATAGCACCCCCACACTTATCATGGGGAGTGCGTCAGGCACATGCATACCTCACTTTTGCAACCTCCCATCCTTTTCAGTGTGCTGCTGCGGTAGCTCTGAGAGCACCAGACTCTTACTATGCAGAGGTGAAGAGGGATTATATGGCAAAGAGAGCTATTTTGGTTGAGGGATTGAAGGCTGTTGGCTTCAAGGTGTTCCCGTCCAGCGGAACCTACTTTGTGGTTGTAGATCACACCCCTTTTGGACTGGAAAATGATGTTGCATTTTGTGAATATCTAGTTAAGGAGGTGGGAGTAGTGGCCATTCCTACTAGTGTATTTTACTTGAATCCAGAAGAGGGAAAGAATCTTGTCAGATTTACGTTTGCCAAGGATGAGGGAACTATTAGGTCTGCTGTCGAGAGGATGAAAGAGAAGCTTAGAAAATGA 1356 0.4373 MQQVYANSPYILMRFTPSSKFLGFSNHFNNLLAPSFSLTSKFPSSISATMSTVSTQNDTVTHKTHQPLQIAKRLEKFQTTIFTQMSLLAIKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGYGVPDLNIAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGIINPGDEVILFAPFYDSYEATLSMAGAKVKSITLRPPDFAVPIEELKSTISKNTRAILLNTPHNPTGKMFTREELDCIASLCIENDVLVFTDEVYDKLAFDIEHISMASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLSWGVRQAHAYLTFATSHPFQCAAAVALRAPDSYYAEVKRDYMAKRAILVEGLKAVGFKVFPSSGTYFVVVDHTPFGLENDVAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFAKDEGTIRSAVERMKEKLRK 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01222 451 SUPERFAMILY PLP-dependent transferases 69 450 IPR015424 -
Phco7g01222 451 Gene3D - 107 345 IPR015421 GO:0003824
Phco7g01222 451 Gene3D Aspartate Aminotransferase, domain 1 84 445 IPR015422 GO:0003824
Phco7g01222 451 PANTHER FI04487P 70 450 - -
Phco7g01222 451 CDD AAT_like 95 447 - -
Phco7g01222 451 FunFam Aminotransferase, class I/classII 107 345 - -
Phco7g01222 451 Pfam Aminotransferase class I and II 95 444 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01222 Phco-Chr7 10728236 10730478 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01222 7 10728236 10730478 Phco7g01222 7 10728236 10730478 ECH