Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01206 ATGCATCCTTTCTGCTGCGTGTCCGCCATTTCCGACCAGGCCTCGCCAGTGAAACCCTCGTTCGCCGACTTCCCCATGCCGCCTCTCCCCGCCGCCGCCGCCGCCACCGTGAGATCCGACTCGGCTCCGCGGCACAGCCACAAGCACAGTCACAGCGGCAGTCAGCGGGAGCAGCCGGTGGACGTGAAGATCAACGACCTCGTCGGCAACGGAATCTCCGGAATACTGTACAAATGGGTGAATTACGGCAAAGGATGGCGACCGCGATGGTTTGTACTCCAAGACGGCGTTCTATCCTACTATAAGATTCACGGACCTGATAAGATCGTCGTGAATCCCGAAACCGAGAAAGGCACCATGGTTATTGGCGAAGAATCCATGCGCAGGATCACTCGCAACCGCAATTCCTATCCCTGCCAGCACGTGCGAAAGCCGTTTGGGGAAATCCATCTCAAGGTTTCGACCATTCGCGATAGCAAATCGGATGACAAGCGGTTCTCGGTCTTCACCGGAACGAAGAGGCTCCACCTGAGGGCGGATACGCGTGAGGATCGCGTGTCGTGGACGGAGGCGTTGCAGGCGGTGAAGGACATGTTCCCGCGGATGTCGAACAGCGAGTTGATGGCTCCGTTGGACAATGTAACCGTTTCGACGGAGAAACTGAGACTTCGGCTTATGGAAGAGGGAGTGAGCGAGGGGGCTATTCAGGACAGTGAGCAAATCATGAAGACTGAGTTTGCGGCGCTGCAAAGCCAGCTTGTGCTGCTTAAGCAGAAGCACTCCATTCTCATTGACACTTTGCGTCAATTAGAGACAGAAAAGGTTGATCTGGAGAATACAGTAGTTGATGAGAGCCAAAGACAGTGGAATGATGAAGAGTCTTCCTCAAGATTAGCGCAAGAAAAATTTAGTGAAGGAACTGCAAGTGAATCTGAAGATGACAATGATCGAAATGATGCTGCAGAGGAAGAAACTGACGATGATGACAATGCCTTTTTTGATACTCGTGATATTCTATCGTCCAGTTCTTTTAAAAGTAATGGGTCTGATTACCGAATGTCATCCTTCTCTTCAGATGATGAAGGGTTCTATGCATTGGAATCAGAGGATGACATAGATCCTTCGATTAGATATGTTGGAACCAATTACCCTCATGTTAAACGGCGTAAGAAATTGCCAGACCCTGTAGAAAAAGAGAAAGGAGTCAGTCTGTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAACGAGCCTCTTTCCTCCCTACAAAAATGTTTTGAAGAAATGGAGTATTCATATCTTTTGGACCAAGCATATGAATGGGGAAGAAGGGTTAATAGCCTCATGAGGGTTCTCTATGTTGCGGCTTTTGCTATATCTGGTTATGCTGCAACAGAAGGAAGAGTTTGCAAACCATTTAATCCGTTACTTGGGGAAACATACGAGGCTCACTATCCAGATAAAGGCCTTCGGTTTTTCTCAGAGAAGGTCAGTCATCACCCTATGATTGTAGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGAGATAGCAACCTAAAGAGCAAATTTTGGGGGCGATCAATTCAGCTTGACCCTGTTGGTATGTTGACTTTGGAATTTGATGATGGGGAAGTTTTCCAGTGGAGTAAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTATACTGTGATCACTATGGTACAATGCGTATACAGGGAAACCAAGAGTACTCGTGTAAACTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCACCAGGTTCATGGTATCATTCAAGATAGGAATGGAAAAACTGTATCAACTTTGTTTGGAAAATGGGATGAAAGCATGCATTACGTTAACGGAGACTACACCGGGAAAGGGAAAGGGCATGAATCTTTGTCAGATGCCCATTTGCTCTGGAAGCGAAGCAAGGCTCCCAAGATTCCCACTAGATACAACTTCACTCGCTTTGCCATCACACTAAACGAACTGACCCCTGGCTTGAAGGAGAAGTTGCCACCTACAGATTCAAGGTTAAGACCAGACCAAAGGTATTTGGAAAATGGGGAGTATGACATGGCAAATTCAGAAAAGTTACGGCTAGAGCAACGGCAGCGCCAGGCTAGGAAGATGCAAGAGAGTGGTTGGAAACCACGGTGGTTTGCAAAGGATAAGGCGAGCGGGACATACCGTTATGTAGGAGGATATTGGGAGGCCCGACAAAGAGGAAACTGGGACTCCTGCCCTGACATCTTTGGCCAAATTCCTTCCGATCATATTTCTGACGAAGGTCAAATTACATTTTAG 2358 0.4695 MHPFCCVSAISDQASPVKPSFADFPMPPLPAAAAATVRSDSAPRHSHKHSHSGSQREQPVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGTMVIGEESMRRITRNRNSYPCQHVRKPFGEIHLKVSTIRDSKSDDKRFSVFTGTKRLHLRADTREDRVSWTEALQAVKDMFPRMSNSELMAPLDNVTVSTEKLRLRLMEEGVSEGAIQDSEQIMKTEFAALQSQLVLLKQKHSILIDTLRQLETEKVDLENTVVDESQRQWNDEESSSRLAQEKFSEGTASESEDDNDRNDAAEEETDDDDNAFFDTRDILSSSSFKSNGSDYRMSSFSSDDEGFYALESEDDIDPSIRYVGTNYPHVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDQAYEWGRRVNSLMRVLYVAAFAISGYAATEGRVCKPFNPLLGETYEAHYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGMLTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCKLKFKEQSIIDRNPHQVHGIIQDRNGKTVSTLFGKWDESMHYVNGDYTGKGKGHESLSDAHLLWKRSKAPKIPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYDMANSEKLRLEQRQRQARKMQESGWKPRWFAKDKASGTYRYVGGYWEARQRGNWDSCPDIFGQIPSDHISDEGQITF 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01206 785 FunFam Oxysterol-binding protein-related protein 2A 700 771 - -
Phco7g01206 785 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 71 757 IPR000648 GO:0008289
Phco7g01206 785 MobiDBLite consensus disorder prediction 315 331 - -
Phco7g01206 785 Gene3D - 489 669 - -
Phco7g01206 785 Pfam Pleckstrin homology domain 77 193 - -
Phco7g01206 785 CDD PH_ORP_plant 72 204 - -
Phco7g01206 785 MobiDBLite consensus disorder prediction 285 299 - -
Phco7g01206 785 MobiDBLite consensus disorder prediction 41 56 - -
Phco7g01206 785 Gene3D - 70 199 IPR011993 -
Phco7g01206 785 FunFam oxysterol-binding protein-related protein 1D isoform X1 489 661 - -
Phco7g01206 785 SMART PH_update 70 199 IPR001849 -
Phco7g01206 785 SUPERFAMILY PH domain-like 72 203 - -
Phco7g01206 785 Gene3D - 700 761 - -
Phco7g01206 785 Pfam Oxysterol-binding protein 403 757 IPR000648 GO:0008289
Phco7g01206 785 SUPERFAMILY Oxysterol-binding protein-like 398 778 IPR037239 -
Phco7g01206 785 MobiDBLite consensus disorder prediction 285 332 - -
Phco7g01206 785 MobiDBLite consensus disorder prediction 33 60 - -
Phco7g01206 785 Coils Coil 260 287 - -
Phco7g01206 785 ProSiteProfiles PH domain profile. 69 197 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01206 Phco-Chr7 10515901 10521666 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01206 7 10515901 10521666 Phco7g01206 7 10515901 10521666 ECH