Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01203 ATGCGCAGCTTCACAGAAACCGCGTCACCCTTCATATTTACGTTAGGTCAAGCAAAGTTGTGTGGTGTTTGGCGCTTCGAAAGGTCACCTTACCATATATGTTCAAAGAGAGAAGAACAGAAGATGGCGCAAACGCTGGCAATGCCCGTGGCATCCTCACTCGCTATAATCTCCAATACTCGCCTTTCCAACACAGTCTCGGTTACCGTTCTGAATCCTCACACCCCAAAGGTTCAGGGCTTGAGCATCAAGTGCGCTCGTGTTGGCGGTGTGGAGATTCCGAACAACAAGCGAATTGAGTACTCTCTGCAGTACATTCATGGAGTTGGGAGGAGCAGAGCGCGACAGATCCTGTGTGATGTAAACATGGATAACAAAATGACAAAGGAGCTCACTGAGGAGGAGCTCGTCACTCTCAGGGACGAAGTATCCAAATACATGACTGAAGGGGACTTGAGACGATTCAATGCGATTAATATAAAGAGACTAAAGGACATTCAGTGCTACAGAGGAATAAGGCATATTCAGGGGCTTCCTTGCAGAGGCCAGCGAACCAAGAACAATTGCAGGACCTTGAAGGGTAAGAAGGTTGCAATTGCCGGCAAAAAGAAAAAGTAA 618 0.4741 MRSFTETASPFIFTLGQAKLCGVWRFERSPYHICSKREEQKMAQTLAMPVASSLAIISNTRLSNTVSVTVLNPHTPKVQGLSIKCARVGGVEIPNNKRIEYSLQYIHGVGRSRARQILCDVNMDNKMTKELTEEELVTLRDEVSKYMTEGDLRRFNAINIKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01203 205 Gene3D 30s ribosomal protein s13, domain 2 155 205 IPR027437 -
Phco7g01203 205 Pfam Ribosomal protein S13/S18 87 191 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Phco7g01203 205 Coils Coil 129 149 - -
Phco7g01203 205 Hamap 30S ribosomal protein S13 [rpsM]. 85 201 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Phco7g01203 205 ProSiteProfiles Ribosomal protein S13 family profile. 88 194 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Phco7g01203 205 Gene3D - 86 154 - -
Phco7g01203 205 SUPERFAMILY S13-like H2TH domain 86 197 IPR010979 GO:0003676
Phco7g01203 205 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 79 203 - -
Phco7g01203 205 ProSitePatterns Ribosomal protein S13 signature. 170 183 IPR018269 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Phco7g01203 205 FunFam 30S ribosomal protein S13 81 154 - -
Phco7g01203 205 FunFam 30S ribosomal protein S13 155 204 - -
Phco7g01203 205 NCBIfam 30S ribosomal protein S13 87 196 IPR019980 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01203 Phco-Chr7 10469548 10473176 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01203 7 10469548 10473176 Phco7g01203 7 10469548 10473176 ECH