Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01178 ATGTCGAGGGTCACTAGGTGGAAGATTGAGAAGACGAAAGTAAAGGTGGTTTTCCGGCTCCAATTCCATGCTACACATATTCCGCAATCTGGGTGGGATAAGCTATTTATCTCTTTCATCCCTGCTGACTCTGGGAAGGCTACATCAAAGACCACCAAAGCAAATGTGAGAAATGGAACCTGCAAGTGGGCAGATCCAATCTATGAAACTACAAGACTCCTTCAAGACATTAAAAGTAGACAATATGAAGAGAAGTTTTATAAATTTGTCGTGGGGATGGGTTCATCGCGATCTAGCATCCTTGGCGAGGCCAACATCAATCTAGCTGATTTTGTTGATGCCTTGAAGCCAACAGCTGTTGCTTTGCCTCTTAATGGAACTGAACCTGGAGTCACACTACATGTCACAGTGCAGCTTCTCACTTCCAAAACTGGCTTCAGAGAATTTGAGCAGCAGAGGGAACTCAGAGAGAGGGGCTTACAGACAACCTCTGACCAAGGTACTCATGAGGAATCTGCCGATAGCAAAGAGTCATCTCCTGACCAGAATGTGAATAATCATATAAATAAGGTTAATTCAAGAGTGAAATTGAAAAGAGAATCTAAAGATGTCCCCCATATTTCTTCACTTGAAGGAGAGTCCAGCGTAAATGAAGAGTATGCTGATTCAGCTGTTGGCTTTGATGGTTCTTCTAGTACTTCTGAAAGCATATATACTGAGAAGCATGATATCTCTAGTACACATGAAGTGGACAGTCTTAAAAGCACAGTCTCCGGTGATTTAGGTGGACTATCCCTCAGTCAAAGTCCTCAGCCAGACAAAGGGGAGGCACCTGATAATCAGTTTCCAGCACAGGGTAGTGATCGGGTTCATGGTTGGAGCATAGACTATTCAGCTGCCAATAGTTTGGCTGCTGCTTCTGAAGATAGGAGCAGTAGTAGACTTATGGGAAATTTGGAAGCAGTTGAGTCATCTATTCTTGATCTAAAATTGAATGTAAGTTCTTTGCAAAATCATGCTGATGAAATAGGTGTTGAAACACATAAGTTTTCTGATCAACTTGCAACTGAGATTTCATCTGGAGAAGAGTTAGCAAAGGAGGTTGCAGTACTAAAATCTGAATGTTCAAAGTTTAGAGATGAGTTTGAGCAGCTTAAAAATTCTAAATTGAGCTTACCATTCCCTCACAAAGATCCTACTGCTACAGATCAGGATAAATTATTTCAAAATTTGCAGCACAAATGGATTAAGGGGCTTTTGCTTATGGAAGATAAGTTAAGAGATATTCAGAAGATGTCTCTGGGATTTCCTGAAAGAGATTTCCGGTTCCTTAACTTGGAGTTAGAAGCACTGGCTGAAATTTTACAGAACCTCAAACAAGAATCTGGAGAGCCAATTTCTGGGGGCAAAGTTGTCAATGAAAGGGAGAACAAGAAAATGGATTTGCATAAAAGTGAACAATTTTTAACAGATATTGGGTCTGATGCAGGTTTATTTCAACCTGAAAGCATGGCTCATTATCTTTCCATACCTGGCCTTGTGTCTCATGAGTTTGATTCTGTTGATCCTACCCTTGCCATGAAAGAGAAAATTTTTGAACTTCTAAGAGAGATAGATGAGTCCAAAACCGAAAGGGAAAGCCTTGTACGGAAAATGGATCAGATGGAATGCTACTATGAAGCTCTTATTCAGGAACTTGAGCAGAATCAAAGGCAGATGATGGCTGAGTTGCAGAACCTTAGGAATGAACATTCTACTTGTCTGTACACAATTTCTGCTGGTAAGACCGAGATGGAGAGAATGCACCAGAATATGAATGAGCAGATGATGAAATTTTCTGAAGACAAGCGCATCTTGGAAACTCTGAACAGTGAGTTTGAAAGAAGGGCTATTTCTGCTGAAGCAGCCCTTAAAAGGGCAAGATTGAATTATTCTATTGCTGTTGGTCAATTGCAAAAAGATCTTGAACTGCTTTCTTGCCAAGTCCTTTCTATGCATGAGACAAATGAGAATCTCATAAAACAGACCCTTTCTGATTCTTCACTTACAAATACTGATGATAGCCCAGAACAAGTGGTGTATCCTAAAGTTTCAGAAGTTCATACTTCCAATCGATTGCTGTGTCAAAATCACAGTTCTTCCTTACAAAGACAACATTTGGGTGAAGACATTTTACTTAATGATTTGAAAAGATCACTTCAGGTGCAAGAGGGGTTATACGTACAAGTTGAAGAGGAAATCAGCCAAATGCATTTTGCAAATATGTACTCTGATGTGTTTTCTAAGGCTCTGCAAGAAACATTGTTTGAAGCAAGTCTTGACATCCAACTCATGAAAGAGAAAATTGCTCAACTCTCTCAGCAGCTGGCGCTTACAGATGAATCCAATGAGTTATTGGTATTGAGGTTGCAGAATGCTATGAATGATATCCTTTCACTAAATGAGTACAAGGAGATCTGCACAGCAAAGAGCAATGATATTGCTCTCCAAAACCAAATTTTAGAGGCAAATTTAAAAAATCTTGCTCATGAAAAAAGTCTTCTTATTGATAAAGTTAATGAGCTGGAAGTTCTTCTGACAGAGTATAGAAGTTATGAGGGAAAGTATGTGGCATGCAGTACAGAAAACTCAGAGTTGAAGAGTTTATTGAAAAAAGAGAGCCTAGAAAATAATCATCTTCATGATGAAATATACATTTTGCAGGAAGAGTTAAAGTCTTGGAGAACTAAAATTGATGAGGAAGTTTTGATGAAGAATAATCTACAGAGTAATGTCACCTTTTTGTCTAATAAGTTGCAGAAATTGCTGGCATTGTATGAAGAAAGTCACAGTGAACTTTCTCTTTGTAGTAAATCTGCTTATTTGGATTCAAAATGTGAAGACTTTGAGGGTCTGTTATTGCGACTAGAAGAGCTGCAACAGAGTGCATTTCATAGAATCCTGCTACTCACAGAAGAGAAGGAGATTTTAGTGCATGATAAACAAAAAACTCAAGTATCTTTAAATTCCGCTGAATCAAATGCTCTTGTCATGAAACAGAAGTTTGAGCATGATTTGCAGGAGATGTTACATAAGATAACTGTGTCAGGTGCTCTGTTGCAGAAACTTCAGTTAGATTTTGAGGTGATCATTGACAGGACTAGTGCTGGTTTTGAAGCTGAAGAATTATACTCTCAGCATCACAAAGAATTTTTGTCTGGTCTTGATCATTTGGAAGCTGAACTGCAACAACTTGATTCCAGAAATCAGGACCTGGCTCAGGAAATAATAAAGCTAGATACTACATCTAGTGAACTTGAAATGTGTAAACTGACCATAGCAAAAATTGAAGAGGAAAAGAAAGATTTGGTGTCATCTTTACAGGAAAAAACTGAAGAATCTGCCAAGATTTCATCTGAGCTTGATTTTTTGAAAAAAAACTTGAATTCTGTGCATAGTGAGTTGCATGCGGAGAAAACTGTCAGAGAAAAGTTGGAGAAAACAATTTCCAATTTTTCCACTGAATTGAAAGAGAAGCAAAGCCAGCTTCAGGGAAAGAGAGATTTGGAGTTGTCTTTACAGGAGAAAACAGAAGAATCAGCCATGATATCATCTGAGCTTGATTTTTTGAAGGTGAACTTACATTCTCTGCATAATGAGTTGCATGCTGAGAAAACTGTCCGAGAAAAGTTGGAGCAAACACTTTCAGATCTTACCACAGAATTAAATGAGAAGCAAAGTCAGCTGCAGGGAAAGAAAGATTTGGAGTCATCTTTACAGGATAAAACAGAAGAATCTGCCAAAATCTCATCTGAGCTAAATTTTTTGGAGAAGAATATGCATTCTCTGCATAATGATTTGCATGCTGAGAAAACTGTCAGAGAAATATTGGAGAAAGCAGTTTCAGATCTAACCGCAGAATTGAGTGAGAAGCAATGTCAGCTACAGGATTCTGATCTGAACAGAAAAGAACTTGTCCATCTCAAGCAAATGGTGTCCGACTTAGAATTTGAAAATTCAAGAATCTCAAATCTTCTACAGAAATCTGAGAAATATCTTAAAGATGCTTTAAAAGAATGTTCTTCTATTAGTTTTCTGGAAACTCTGTTATCTGAAATGAATGAATTTTGCATAGCTACAGATATTGTCATGACTTTTACTGGAGCTCAGTTTAATGATCATTTGGAAGAGCTTGCTGAGAAGCTTCATTTCACTTGCAGGCAACTTGATGTGCTTCACAAGAAGAATTTTGATATAGAATCTGAATTAAATCGCTGTCTTTGCAGAGAATTGACATGCATTGAAGAAAATACAAGATTGTTGACGAGTCTTGACTTCCTGAAGTCCGAGTTAGAGGTCTTGACTGCTCAGAATAGAGAACTAATTGATCAAAACAGTGCAATTATGTCAGAGGTTAAGGATCACAAGAATAGGACAGAAGAGGTCAGTTATACTAATGTGCATGAAAGAGAGAATGTCCTTGAGGTTGCAAGGCTGGAGCAATTGCTGGAAAGTTGTCGTAGAGATGCTGAAGAACTTTTTTTGTCTAAGGAAGAAGCTGAACTCAAGTGTATAGTTCTCCAGGACAAATTGGATGAACTGGAAACTGCATTCACTTCATTAAAACAATCAGATGATGAACTGATAAGGCTGCAGAACCAATGTAATGAGCTTACCAAGAGGCTTACGGAACAGGTTTTGAAGACAGAAGAGTTTAAGAATTTGTCTATTCATCTGAAGGAACTGAAAGACAAAGCTGAGGCTGAGTGTCTTAATGCTCATGACAGAAGAGGACATGAAGGACCGCCAGTTGCTATGCAGGAGTCCTTGAGAATTGCATTTATCAAGGAACAATATGAATCGAAGTTGCAAGAACTAAGACAGCAGTTGTCTTTGTCAAAAAAGCACAGCGAGGAAATGCTGTGGAAACTACAGGATGCAGTTGATGAAACGGAGAATAGAAAAAAGTCTGAAGCTTCTCATATAAAAATTAACGAAGAGCTGGGGATGAAGATCTTGGACTTGGAGGCTGAGTTACAGGCTGTACTTTCTGATAAGCGTAATTTGTTGAATGCTTATGACCTGCTAAAGGCTGAAAAAGAGTGTTCCGCAATAAGCCTTGAATGTTGTAAGCAAGAAAAGCAAGAGCTTGAAGCTTCTCTTGTAAAATGCGATTCGGAGAAATCCAGAATTGAAGTAGAACTTACCTTGGCGAAGGAATTGTTGGAGACTTCGAGATCTCATGCAAATTCTCTAAACAAGGGCAATGGTACATTATCTTCTTCATTGAATCCTCAACAAAATTCTAATCATGAGACACAGAGTGCTAGTTTGCTCATCAACATGCAACCCGAGGATCCTGTTGCATTTAGTGTGATGAATGGAGGACAAACACTTGAAAGTGAAAAGGACTTGCAACAAGAAGTAATGAAGAATGTGGCATCAACCGAAAGTTTGAAATCTAGCATTGACCACTTGAGTAAAGAGCTGGAAAGGATGAAAAATGAGAATATGCTTCCTTCAGTAGATGGTCATAGTCATGATGAGCCAAGTTTCCCAGGTCTGCAAAGAGAATTGATTCAGCTACATGAGGCCAATCAAGAATTAGGAAACATATTCCCTGTATTCGATAAATTATCAGTCAGCGGTAATGCATTAGAAAGGGTGCTTGCTTTAGAGATTGAGCTTGCTGAATCATTGCGGACCAAGAAGTCAAACATCCAATTTCAGAGTTCTTTCTTGAAACATCATGGTGATGAGGAAGCAGTATTCCGAAGCTTCAGGGATATCAATGAGCTAATTAAAGATATGTTAGAACTAAAGACAAGACATTCTGCTGTGGAGACAGAACTGAAAGAGATGCATGACCGTTACTCTCAATTAAGTCTTCAATTTGCGGAGGTTGAAGGTGAGAGACAAAAACTCATGATGAGTATAAAGAATACTCGAGCATCCAAGAAGGCTTCAAGTTAA 5952 0.3858 MSRVTRWKIEKTKVKVVFRLQFHATHIPQSGWDKLFISFIPADSGKATSKTTKANVRNGTCKWADPIYETTRLLQDIKSRQYEEKFYKFVVGMGSSRSSILGEANINLADFVDALKPTAVALPLNGTEPGVTLHVTVQLLTSKTGFREFEQQRELRERGLQTTSDQGTHEESADSKESSPDQNVNNHINKVNSRVKLKRESKDVPHISSLEGESSVNEEYADSAVGFDGSSSTSESIYTEKHDISSTHEVDSLKSTVSGDLGGLSLSQSPQPDKGEAPDNQFPAQGSDRVHGWSIDYSAANSLAAASEDRSSSRLMGNLEAVESSILDLKLNVSSLQNHADEIGVETHKFSDQLATEISSGEELAKEVAVLKSECSKFRDEFEQLKNSKLSLPFPHKDPTATDQDKLFQNLQHKWIKGLLLMEDKLRDIQKMSLGFPERDFRFLNLELEALAEILQNLKQESGEPISGGKVVNERENKKMDLHKSEQFLTDIGSDAGLFQPESMAHYLSIPGLVSHEFDSVDPTLAMKEKIFELLREIDESKTERESLVRKMDQMECYYEALIQELEQNQRQMMAELQNLRNEHSTCLYTISAGKTEMERMHQNMNEQMMKFSEDKRILETLNSEFERRAISAEAALKRARLNYSIAVGQLQKDLELLSCQVLSMHETNENLIKQTLSDSSLTNTDDSPEQVVYPKVSEVHTSNRLLCQNHSSSLQRQHLGEDILLNDLKRSLQVQEGLYVQVEEEISQMHFANMYSDVFSKALQETLFEASLDIQLMKEKIAQLSQQLALTDESNELLVLRLQNAMNDILSLNEYKEICTAKSNDIALQNQILEANLKNLAHEKSLLIDKVNELEVLLTEYRSYEGKYVACSTENSELKSLLKKESLENNHLHDEIYILQEELKSWRTKIDEEVLMKNNLQSNVTFLSNKLQKLLALYEESHSELSLCSKSAYLDSKCEDFEGLLLRLEELQQSAFHRILLLTEEKEILVHDKQKTQVSLNSAESNALVMKQKFEHDLQEMLHKITVSGALLQKLQLDFEVIIDRTSAGFEAEELYSQHHKEFLSGLDHLEAELQQLDSRNQDLAQEIIKLDTTSSELEMCKLTIAKIEEEKKDLVSSLQEKTEESAKISSELDFLKKNLNSVHSELHAEKTVREKLEKTISNFSTELKEKQSQLQGKRDLELSLQEKTEESAMISSELDFLKVNLHSLHNELHAEKTVREKLEQTLSDLTTELNEKQSQLQGKKDLESSLQDKTEESAKISSELNFLEKNMHSLHNDLHAEKTVREILEKAVSDLTAELSEKQCQLQDSDLNRKELVHLKQMVSDLEFENSRISNLLQKSEKYLKDALKECSSISFLETLLSEMNEFCIATDIVMTFTGAQFNDHLEELAEKLHFTCRQLDVLHKKNFDIESELNRCLCRELTCIEENTRLLTSLDFLKSELEVLTAQNRELIDQNSAIMSEVKDHKNRTEEVSYTNVHERENVLEVARLEQLLESCRRDAEELFLSKEEAELKCIVLQDKLDELETAFTSLKQSDDELIRLQNQCNELTKRLTEQVLKTEEFKNLSIHLKELKDKAEAECLNAHDRRGHEGPPVAMQESLRIAFIKEQYESKLQELRQQLSLSKKHSEEMLWKLQDAVDETENRKKSEASHIKINEELGMKILDLEAELQAVLSDKRNLLNAYDLLKAEKECSAISLECCKQEKQELEASLVKCDSEKSRIEVELTLAKELLETSRSHANSLNKGNGTLSSSLNPQQNSNHETQSASLLINMQPEDPVAFSVMNGGQTLESEKDLQQEVMKNVASTESLKSSIDHLSKELERMKNENMLPSVDGHSHDEPSFPGLQRELIQLHEANQELGNIFPVFDKLSVSGNALERVLALEIELAESLRTKKSNIQFQSSFLKHHGDEEAVFRSFRDINELIKDMLELKTRHSAVETELKEMHDRYSQLSLQFAEVEGERQKLMMSIKNTRASKKASS 1983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01178 1983 Coils Coil 768 795 - -
Phco7g01178 1983 Coils Coil 1496 1530 - -
Phco7g01178 1983 Coils Coil 918 938 - -
Phco7g01178 1983 Coils Coil 1155 1175 - -
Phco7g01178 1983 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Phco7g01178 1983 MobiDBLite consensus disorder prediction 193 207 - -
Phco7g01178 1983 Coils Coil 1437 1457 - -
Phco7g01178 1983 MobiDBLite consensus disorder prediction 1240 1257 - -
Phco7g01178 1983 Coils Coil 1609 1647 - -
Phco7g01178 1983 MobiDBLite consensus disorder prediction 155 288 - -
Phco7g01178 1983 MobiDBLite consensus disorder prediction 1235 1257 - -
Phco7g01178 1983 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 975 - -
Phco7g01178 1983 Coils Coil 1534 1561 - -
Phco7g01178 1983 MobiDBLite consensus disorder prediction 250 275 - -
Phco7g01178 1983 Coils Coil 726 746 - -
Phco7g01178 1983 Coils Coil 368 388 - -
Phco7g01178 1983 Coils Coil 1287 1307 - -
Phco7g01178 1983 Coils Coil 595 615 - -
Phco7g01178 1983 Coils Coil 1923 1943 - -
Phco7g01178 1983 MobiDBLite consensus disorder prediction 155 177 - -
Phco7g01178 1983 MobiDBLite consensus disorder prediction 226 240 - -
Phco7g01178 1983 Coils Coil 831 858 - -
Phco7g01178 1983 Coils Coil 1207 1272 - -
Phco7g01178 1983 Coils Coil 441 461 - -
Phco7g01178 1983 Coils Coil 1809 1829 - -
Phco7g01178 1983 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 140 IPR019448 -
Phco7g01178 1983 MobiDBLite consensus disorder prediction 1742 1767 - -
Phco7g01178 1983 Coils Coil 1068 1140 - -
Phco7g01178 1983 Coils Coil 1700 1720 - -
Phco7g01178 1983 Coils Coil 623 643 - -
Phco7g01178 1983 Coils Coil 531 583 - -
Phco7g01178 1983 Coils Coil 1665 1685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01178 Phco-Chr7 10207423 10217869 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01178 7 10207423 10217869 Phco7g01178 7 10207423 10217869 ECH